RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 SLC9A3R1O14745 358 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-205ENST00000423941 MMP8P22894 467 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 YWHAZP63104 245 aaKnown RBP19.31■□□□□ 0.68
HDAC6-205ENST00000423941 ZBED6P86452 979 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 ARID5AQ03989 594 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 PTP4A2Q12974 167 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 ITPRIPL2Q3MIP1 535 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 SLC26A9Q7LBE3 791 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 ZNF687Q8N1G0 1237 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 EDEM1Q92611 657 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 C18orf8Q96DM3 657 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 CHFRQ96EP1 664 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 NACA2Q9H009 215 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 NUCKS1Q9H1E3 243 aaKnown RBP19.31■□□□□ 0.68
HDAC6-205ENST00000423941 PDCL3Q9H2J4 239 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 C8orf33Q9H7E9 229 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-205ENST00000423941 GTSE1Q9NYZ3 720 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 TBC1D14Q9P2M4 693 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 FBXL21Q9UKT6 434 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 CA14Q9ULX7 337 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 HBS1LQ9Y450 684 aaKnown RBP19.31■□□□□ 0.68
HDAC6-205ENST00000423941 WNT6Q9Y6F9 365 aa19.31■□□□□ 0.68
HDAC6-205ENST00000423941 PDGFBP01127 241 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-205ENST00000423941 IGLV3-27P01718 113 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 KLKB1P03952 638 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 ARSAP15289 507 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 HNRNPH3P31942 346 aaKnown RBP19.3■□□□□ 0.68
HDAC6-205ENST00000423941 SLC6A3Q01959 620 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 CENPCQ03188 943 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 EFEMP1Q12805 493 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 ARID5BQ14865 1188 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 TAF5Q15542 800 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 TRIP4Q15650 581 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-205ENST00000423941 CLEC16AQ2KHT3 1053 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 EFHC1Q5JVL4 640 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 TMEM31Q5JXX7 168 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 SFMBT2Q5VUG0 894 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 SYPL2Q5VXT5 272 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 NAA35Q5VZE5 725 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 HGSNATQ68CP4 663 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 SPECC1LQ69YQ0 1117 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 TRIM68Q6AZZ1 485 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 FAM183BPQ6ZVS7 135 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 ERICH1Q86X53 443 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 XYLT1Q86Y38 959 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 VSTM4Q8IW00 320 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 CPA5Q8WXQ8 436 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 ATP2A3Q93084 1043 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 MSANTD3Q96H12 275 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 SHDQ96IW2 340 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 SLC2A13Q96QE2 648 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 ANP32EQ9BTT0 268 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 TRIM62Q9BVG3 475 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 EBF3Q9H4W6 596 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 POPDC2Q9HBU9 364 aa19.3■□□□□ 0.68
HDAC6-205ENST00000423941 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.3■□□□□ 0.688e-7■■■□□ 17.5
HDAC6-205ENST00000423941 MYOFQ9NZM1 2061 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 FAM86C2PA6NEL3 165 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 IGLV3-25P01717 112 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 CLCN5P51795 746 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 GSCP56915 257 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-205ENST00000423941 NNTQ13423 1086 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 GAB4Q2WGN9 574 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 RSRC2Q7L4I2 434 aaKnown RBP19.29■□□□□ 0.68
HDAC6-205ENST00000423941 ARCQ7LC44 396 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 RALGPS2Q86X27 583 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-205ENST00000423941 PHF13Q86YI8 300 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-205ENST00000423941 MIB1Q86YT6 1006 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 CSGALNACT1Q8TDX6 532 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 IPO4Q8TEX9 1081 aaKnown RBP19.29■□□□□ 0.68
HDAC6-205ENST00000423941 RNF139Q8WU17 664 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 PBXIP1Q96AQ6 731 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 LRFN3Q9BTN0 628 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 ECT2Q9H8V3 914 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 RASAL2Q9UJF2 1139 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 STRIP2Q9ULQ0 834 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 NAALADL1Q9UQQ1 740 aa19.29■□□□□ 0.68
HDAC6-205ENST00000423941 F5P12259 2224 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 NCAM1P13591 858 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 CTHP32929 405 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 IFNAR2P48551 515 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 RING1Q06587 406 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 GOLGA8FQ08AF8 430 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 GOLGA8DPQ0D2H9 430 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 FZD5Q13467 585 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 ASIC2Q16515 512 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 CWF19L1Q69YN2 538 aaKnown RBP19.28■□□□□ 0.68
HDAC6-205ENST00000423941 OR6B2Q6IFH4 312 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 C1orf228Q6PIY5 440 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 RHBDF2Q6PJF5 856 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 ZNF571Q7Z3V5 609 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-205ENST00000423941 BBS7Q8IWZ6 715 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 FBXL6Q8N531 539 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 SLC30A5Q8TAD4 765 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 DQX1Q8TE96 717 aaKnown RBP19.28■□□□□ 0.68
HDAC6-205ENST00000423941 GOLGA1Q92805 767 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 FAM149B1Q96BN6 582 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 PLD4Q96BZ4 506 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 OSBPL6Q9BZF3 934 aa19.28■□□□□ 0.68
HDAC6-205ENST00000423941 DCLK3Q9C098 648 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms