RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PLK5Q496M5 336 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 RAB41Q5JT25 222 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 BTBD8Q5XKL5 378 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 Q6ZNB5 142 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 RASSF3Q86WH2 238 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 MIB1Q86YT6 1006 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 ABCA7Q8IZY2 2146 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 ANKRD52Q8NB46 1076 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 MDGA1Q8NFP4 955 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 P2RY11Q96G91 374 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 ARRDC1-AS1Q9H2J1 176 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 CLIC5Q9NZA1 410 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 RASAL2Q9UJF2 1139 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 LSM7Q9UK45 103 aaKnown RBP15.96■□□□□ 0.15
USB1-202ENST00000423271 TSPAN16Q9UKR8 245 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 CDV3Q9UKY7 258 aaKnown RBP15.96■□□□□ 0.15
USB1-202ENST00000423271 INVSQ9Y283 1065 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 MED19A0JLT2 244 aaPredicted RBP15.95■□□□□ 0.14
USB1-202ENST00000423271 NEDD8-MDP1E9PL57 170 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 GDF9O60383 454 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 ADAM23O75077 832 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 STC2O76061 302 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 RALAP11233 206 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 CD19P15391 556 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 TNFRSF4P43489 277 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 PLA2G4AP47712 749 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 TKTL1P51854 596 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 EFEMP1Q12805 493 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 SGO2Q562F6 1265 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 TPGS1Q6ZTW0 290 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 TERB1Q8NA31 727 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 NDRG1Q92597 394 aaKnown RBP15.95■□□□□ 0.14
USB1-202ENST00000423271 KAT5Q92993 513 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 ZC3H10Q96K80 434 aaKnown RBP15.95■□□□□ 0.14
USB1-202ENST00000423271 CNOT6LQ96LI5 555 aaKnown RBP15.95■□□□□ 0.14
USB1-202ENST00000423271 BBS2Q9BXC9 721 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 ULBP1Q9BZM6 244 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 UBXN6Q9BZV1 441 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 DUSP15Q9H1R2 295 aaPredicted RBP15.95■□□□□ 0.14
USB1-202ENST00000423271 SMOC1Q9H4F8 434 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 DNAJC17Q9NVM6 304 aaKnown RBP15.95■□□□□ 0.14
USB1-202ENST00000423271 DEC1Q9P2X7 70 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 HCN2Q9UL51 889 aa15.95■□□□□ 0.14
USB1-202ENST00000423271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.94■□□□□ 0.14
USB1-202ENST00000423271 TBC1D3BA6NDS4 549 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 XPO1O14980 1071 aaKnown RBP15.94■□□□□ 0.14
USB1-202ENST00000423271 CALCAP01258 141 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 KLKB1P03952 638 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 HMBSP08397 361 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 TYRP14679 529 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 TBXAS1P24557 533 aaPredicted RBP15.94■□□□□ 0.14
USB1-202ENST00000423271 BCAT1P54687 386 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 YWHAEP62258 255 aaKnown RBP15.94■□□□□ 0.14
USB1-202ENST00000423271 PAK1Q13153 545 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 SF3A2Q15428 464 aaKnown RBP15.94■□□□□ 0.14
USB1-202ENST00000423271 C10orf76Q5T2E6 689 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 GRAMD4Q6IC98 578 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 RBM43Q6ZSC3 357 aaKnown RBP15.94■□□□□ 0.14
USB1-202ENST00000423271 BHLHA9Q7RTU4 235 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 TADA2BQ86TJ2 420 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 ZNF276Q8N554 614 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 LMO3Q8TAP4 145 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 UBA3Q8TBC4 463 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 BHMTQ93088 406 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 LOXL4Q96JB6 756 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 NT5C1BQ96P26 610 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 MARK1Q9P0L2 795 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 TMEM63CQ9P1W3 806 aa15.94■□□□□ 0.14
USB1-202ENST00000423271 LAMA1P25391 3075 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 BICDL2A1A5D9 508 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 O00370 1275 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 PMM2O15305 246 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 CACNG3O60359 315 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 BCKDHBP21953 392 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 SLC8A3P57103 927 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 YWHAGP61981 247 aaKnown RBP eCLIP15.93■□□□□ 0.14
USB1-202ENST00000423271 ADIGQ0VDE8 80 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 BST2Q10589 180 aaKnown RBP15.93■□□□□ 0.14
USB1-202ENST00000423271 HSF5Q4G112 596 aaPredicted RBP15.93■□□□□ 0.14
USB1-202ENST00000423271 EOGTQ5NDL2 527 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 CCDC183Q5T5S1 534 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 FOXR2Q6PJQ5 311 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 TMEM270Q6UE05 265 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 TOGARAM2Q6ZUX3 1019 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 ARHGEF19Q8IW93 802 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 PPM1KQ8N3J5 372 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 ZNF513Q8N8E2 541 aaPredicted RBP15.93■□□□□ 0.14
USB1-202ENST00000423271 TFAP2BQ92481 460 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 ZSWIM1Q9BR11 485 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 PLK2Q9NYY3 685 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 HESX1Q9UBX0 185 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 PCDHB4Q9Y5E5 795 aa15.93■□□□□ 0.14
USB1-202ENST00000423271 DCDC2BA2VCK2 349 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 RNF225M0QZC1 329 aaPredicted RBP15.92■□□□□ 0.14
USB1-202ENST00000423271 ZBED1O96006 694 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 VDRP11473 427 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 SDHBP21912 280 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 CORO1AP31146 461 aaKnown RBP15.92■□□□□ 0.14
USB1-202ENST00000423271 GBP1P32455 592 aa15.92■□□□□ 0.14
USB1-202ENST00000423271 MPLP40238 635 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms