RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 HDCP19113 662 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 FCARP24071 287 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 AVPR1AP37288 418 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 GALCP54803 685 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 SLC7A9P82251 487 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 FAM78AQ5JUQ0 283 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 PPP1R15BQ5SWA1 713 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 PLEKHA7Q6IQ23 1121 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 RSRC2Q7L4I2 434 aaKnown RBP17.77■□□□□ 0.44
COL7A1-202ENST00000422991 ARCQ7LC44 396 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 CCDC112Q8NEF3 446 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 SMARCD2Q92925 531 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 EIF3CQ99613 913 aaKnown RBP17.77■□□□□ 0.44
COL7A1-202ENST00000422991 PACSIN1Q9BY11 444 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 TRPV4Q9HBA0 871 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 PRKAG3Q9UGI9 489 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 DNMT3LQ9UJW3 386 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 NUDT5Q9UKK9 219 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 NAALADL1Q9UQQ1 740 aa17.77■□□□□ 0.44
COL7A1-202ENST00000422991 EPN1Q9Y6I3 576 aaPredicted RBP17.77■□□□□ 0.44
COL7A1-202ENST00000422991 ANKRD62A6NC57 917 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 MDM4O15151 490 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 GJB6O95452 261 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 NCAM1P13591 858 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 ABCB4P21439 1286 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 ATP5C1P36542 298 aaKnown RBP17.76■□□□□ 0.43
COL7A1-202ENST00000422991 FLT3P36888 993 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 EFEMP1Q12805 493 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 SYPL2Q5VXT5 272 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 TRNP1Q6NT89 227 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 ARID3BQ8IVW6 561 aaPredicted RBP17.76■□□□□ 0.43
COL7A1-202ENST00000422991 LRRC8AQ8IWT6 810 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 ADHFE1Q8IWW8 467 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 ZDHHC14Q8IZN3 488 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 DEFB106AQ8N104 65 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 DQX1Q8TE96 717 aaKnown RBP17.76■□□□□ 0.43
COL7A1-202ENST00000422991 RNF139Q8WU17 664 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 USP13Q92995 863 aaPredicted RBP17.76■□□□□ 0.43
COL7A1-202ENST00000422991 RPGRIP1Q96KN7 1286 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 ZFRQ96KR1 1074 aaKnown RBP17.76■□□□□ 0.43
COL7A1-202ENST00000422991 SELENOOQ9BVL4 669 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 NACA2Q9H009 215 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 THAP2Q9H0W7 228 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 SMG9Q9H0W8 520 aaKnown RBP17.76■□□□□ 0.43
COL7A1-202ENST00000422991 SMOC2Q9H3U7 446 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 CNOT8Q9UFF9 292 aaKnown RBP17.76■□□□□ 0.43
COL7A1-202ENST00000422991 ARHGAP26Q9UNA1 814 aa17.76■□□□□ 0.43
COL7A1-202ENST00000422991 SIGLEC16A6NMB1 481 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 LOC730098B7Z3J9 87 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 CAPN9O14815 690 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 CYP1A2P05177 515 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 H2AFZP0C0S5 128 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 MBL2P11226 248 aaPredicted RBP17.75■□□□□ 0.43
COL7A1-202ENST00000422991 KRT3P12035 628 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 MATKP42679 507 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 RNASE9P60153 205 aaKnown RBP17.75■□□□□ 0.43
COL7A1-202ENST00000422991 CCZ1BP86790 482 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 CCZ1P86791 482 aaPredicted RBP17.75■□□□□ 0.43
COL7A1-202ENST00000422991 ZP2Q05996 745 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 CCDC173Q0VFZ6 552 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 MAMLD1Q13495 774 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 DCAF6Q58WW2 860 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 C10orf76Q5T2E6 689 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 H2AFVQ71UI9 128 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 GJD3Q8N144 294 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 JOSD2Q8TAC2 188 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 ARHGEF26Q96DR7 871 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 KIF9Q9HAQ2 790 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 TDP1Q9NUW8 608 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 PARVAQ9NVD7 372 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL7A1-202ENST00000422991 MARCH2Q9P0N8 246 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 RASAL2Q9UJF2 1139 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 CCL26Q9Y258 94 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 CPQQ9Y646 472 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 SCINQ9Y6U3 715 aa17.75■□□□□ 0.43
COL7A1-202ENST00000422991 ANHXE9PGG2 379 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 IGLV3-25P01717 112 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 TMEM253P0C7T8 217 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 TCF3P15923 654 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 NOS2P35228 1153 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 GPC5P78333 572 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 PITX1P78337 314 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-202ENST00000422991 USP4Q13107 963 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 HTR4Q13639 388 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 SPA17Q15506 151 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 OTUD1Q5VV17 481 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-202ENST00000422991 MTSS1LQ765P7 747 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 TAC4Q86UU9 113 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 MIB1Q86YT6 1006 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 PLCD3Q8N3E9 789 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 EMC1Q8N766 993 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 CTNNBL1Q8WYA6 563 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-202ENST00000422991 RSPRY1Q96DX4 576 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 MCEEQ96PE7 176 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 PPP1R9BQ96SB3 815 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 DDX23Q9BUQ8 820 aaKnown RBP17.74■□□□□ 0.43
COL7A1-202ENST00000422991 KLF16Q9BXK1 252 aaPredicted RBP17.74■□□□□ 0.43
COL7A1-202ENST00000422991 SMPD4Q9NXE4 827 aa17.74■□□□□ 0.43
COL7A1-202ENST00000422991 MYO1AQ9UBC5 1043 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms