RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CDH5P33151 784 aaPredicted RBP16.48■□□□□ 0.23
BRAT1-202ENST00000421712 NR1H3Q13133 447 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 RUNX3Q13761 415 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 PTPN20Q4JDL3 420 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 FAM183BPQ6ZVS7 135 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 IRF2BP2Q7Z5L9 587 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 CPA6Q8N4T0 437 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 ATP2A3Q93084 1043 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 C18orf8Q96DM3 657 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 IQCDQ96DY2 449 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 ZFRQ96KR1 1074 aaKnown RBP16.48■□□□□ 0.23
BRAT1-202ENST00000421712 TBC1D14Q9P2M4 693 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 LUC7L2Q9Y383 392 aaKnown RBP16.48■□□□□ 0.23
BRAT1-202ENST00000421712 PIAS3Q9Y6X2 628 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 HELZP42694 1942 aaKnown RBP16.48■□□□□ 0.23
BRAT1-202ENST00000421712 TECTAO75443 2155 aa16.48■□□□□ 0.23
BRAT1-202ENST00000421712 ARNTLO00327 626 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 GRAP2O75791 330 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 TPM1P09493 284 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 CD72P21854 359 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 RNASE9P60153 205 aaKnown RBP16.47■□□□□ 0.23
BRAT1-202ENST00000421712 YWHAZP63104 245 aaKnown RBP16.47■□□□□ 0.23
BRAT1-202ENST00000421712 NOMO3P69849 1222 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 PRKCQQ04759 706 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 KLHL30Q0D2K2 578 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 EFHC1Q5JVL4 640 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 ZNF852Q6ZMS4 543 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 TOGARAM2Q6ZUX3 1019 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 SUGP1Q8IWZ8 645 aaKnown RBP16.47■□□□□ 0.23
BRAT1-202ENST00000421712 SLC30A5Q8TAD4 765 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 TTYH3Q9C0H2 523 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 NUCKS1Q9H1E3 243 aaKnown RBP16.47■□□□□ 0.23
BRAT1-202ENST00000421712 C8orf33Q9H7E9 229 aaPredicted RBP16.47■□□□□ 0.23
BRAT1-202ENST00000421712 TBC1D17Q9HA65 648 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 POPDC2Q9HBU9 364 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 AIPL1Q9NZN9 384 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 CAPN11Q9UMQ6 739 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 NAALADL1Q9UQQ1 740 aa16.47■□□□□ 0.23
BRAT1-202ENST00000421712 A0A1W2PQJ5 194 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 PRR33A8MZF0 331 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 MAN2B1O00754 1011 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 NFATC1O95644 943 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 CYP1A1P04798 512 aaPredicted RBP16.46■□□□□ 0.23
BRAT1-202ENST00000421712 SKILP12757 684 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 NSFP46459 744 aaKnown RBP16.46■□□□□ 0.23
BRAT1-202ENST00000421712 SOX9P48436 509 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 ZBED6P86452 979 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 AMPD2Q01433 879 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 SLC6A3Q01959 620 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 UBXN2BQ14CS0 331 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 TAF5Q15542 800 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 EML3Q32P44 896 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 C2CD6Q53TS8 623 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 SPECC1LQ69YQ0 1117 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 GAS2L3Q86XJ1 694 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 ZDHHC17Q8IUH5 632 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 BBS7Q8IWZ6 715 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 FAM3CQ92520 227 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 WBP2Q969T9 261 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 PCDHB18PQ96TA0 734 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 HAUS4Q9H6D7 363 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 ECT2Q9H8V3 914 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 C11orf16Q9NQ32 467 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 HPS4Q9NQG7 708 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 MRPS17Q9Y2R5 130 aaKnown RBP16.46■□□□□ 0.23
BRAT1-202ENST00000421712 TICRRQ7Z2Z1 1910 aa16.46■□□□□ 0.23
BRAT1-202ENST00000421712 ITIH6Q6UXX5 1313 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 GOLGA8SH3BPF8 625 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 MSI1O43347 362 aaKnown RBP16.45■□□□□ 0.22
BRAT1-202ENST00000421712 HSF2BPO75031 334 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 STC2O76061 302 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 GLI1P08151 1106 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 GLULP15104 373 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 CASP14P31944 242 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 HARS2P49590 506 aaKnown RBP16.45■□□□□ 0.22
BRAT1-202ENST00000421712 STARD6P59095 220 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 TRIM14Q14142 442 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 CLEC16AQ2KHT3 1053 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 DCAF6Q58WW2 860 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 FAM102AQ5T9C2 384 aaPredicted RBP16.45■□□□□ 0.22
BRAT1-202ENST00000421712 MMS22LQ6ZRQ5 1243 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 HTR3DQ70Z44 454 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 BMP8AQ7Z5Y6 402 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 PHLDB2Q86SQ0 1253 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 ADGRG2Q8IZP9 1017 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 FBXL6Q8N531 539 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 KIAA1958Q8N8K9 716 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 PIWIL1Q96J94 861 aaKnown RBP16.45■□□□□ 0.22
BRAT1-202ENST00000421712 LRFN3Q9BTN0 628 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 FOXQ1Q9C009 403 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 DCLK3Q9C098 648 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 NDRG2Q9UN36 371 aaKnown RBP16.45■□□□□ 0.22
BRAT1-202ENST00000421712 ZNF510Q9Y2H8 683 aa16.45■□□□□ 0.22
BRAT1-202ENST00000421712 HBS1LQ9Y450 684 aaKnown RBP16.45■□□□□ 0.22
BRAT1-202ENST00000421712 TRIOO75962 3097 aa16.44■□□□□ 0.22
BRAT1-202ENST00000421712 KANSL1LA0AUZ9 987 aa16.44■□□□□ 0.22
BRAT1-202ENST00000421712 OTOL1A6NHN0 477 aaPredicted RBP16.44■□□□□ 0.22
BRAT1-202ENST00000421712 FAM170BA6NMN3 283 aa16.44■□□□□ 0.22
BRAT1-202ENST00000421712 TMCO5BA8MYB1 307 aa16.44■□□□□ 0.22
BRAT1-202ENST00000421712 SPECC1L-ADORA2AF8WAN1 911 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms