RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 KCTD2Q14681 263 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 LONRF3Q496Y0 759 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 CERKLQ49MI3 558 aaPredicted RBP6.27□□□□□ -1.41
VPS45-203ENST00000419023 PABPC1LQ4VXU2 614 aaKnown RBP6.27□□□□□ -1.41
VPS45-203ENST00000419023 PDCD4Q53EL6 469 aaKnown RBP6.27□□□□□ -1.41
VPS45-203ENST00000419023 PRAMEF19Q5SWL8 479 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 TSHZ3Q63HK5 1081 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 GRAMD1CQ8IYS0 662 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 ABRAQ8N0Z2 381 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 C3orf20Q8ND61 904 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 SLC25A43Q8WUT9 341 aaPredicted RBP6.27□□□□□ -1.41
VPS45-203ENST00000419023 HPS3Q969F9 1004 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 RGMAQ96B86 450 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 MAP3K14Q99558 947 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 ARNT2Q9HBZ2 717 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 SLC2A4RGQ9NR83 387 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 AATFQ9NY61 560 aaKnown RBP eCLIP6.27□□□□□ -1.41
VPS45-203ENST00000419023 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 COG5Q9UP83 839 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 CHST2Q9Y4C5 530 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 PCDHA3Q9Y5H8 950 aa6.27□□□□□ -1.41
VPS45-203ENST00000419023 CDHR4A6H8M9 788 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 DIRC3C9JPN6 131 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 NPIPB8E9PQR5 432 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 CNMDO75829 334 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 LDHAP00338 332 aaKnown RBP6.26□□□□□ -1.41
VPS45-203ENST00000419023 FTLP02792 175 aaPredicted RBP6.26□□□□□ -1.41
VPS45-203ENST00000419023 MTHFD1P11586 935 aaKnown RBP6.26□□□□□ -1.41
VPS45-203ENST00000419023 NR4A1P22736 598 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 SLC6A4P31645 630 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 ACLYP53396 1101 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 CCDC158Q5M9N0 1113 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 AGAP9Q5VTM2 703 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 ZNF365Q70YC5 407 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 ANKRD33Q7Z3H0 272 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 FITM2Q8N6M3 262 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 PCSK9Q8NBP7 692 aaKnown RBP6.26□□□□□ -1.41
VPS45-203ENST00000419023 NLGN4YQ8NFZ3 816 aaPredicted RBP6.26□□□□□ -1.41
VPS45-203ENST00000419023 TTC8Q8TAM2 541 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 MOV10L1Q9BXT6 1211 aaKnown RBP6.26□□□□□ -1.41
VPS45-203ENST00000419023 SLC46A2Q9BY10 475 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 SPATC1LQ9H0A9 340 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 SH2D4AQ9H788 454 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 MAN1C1Q9NR34 630 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 HMG20BQ9P0W2 317 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 POLHQ9Y253 713 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 REXO2Q9Y3B8 237 aaKnown RBP6.26□□□□□ -1.41
VPS45-203ENST00000419023 PHIPQ8WWQ0 1821 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 EYSQ5T1H1 3165 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 MAST2Q6P0Q8 1798 aa6.26□□□□□ -1.41
VPS45-203ENST00000419023 ELP1O95163 1332 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 FLT1P17948 1338 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 PLXNB2O15031 1838 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 MPHOSPH10O00566 681 aaKnown RBP6.25□□□□□ -1.41
VPS45-203ENST00000419023 ERC2O15083 957 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 PRPF3O43395 683 aaKnown RBP6.25□□□□□ -1.41
VPS45-203ENST00000419023 SH3BP5O60239 455 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 FLOT1O75955 427 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 NCR1O76036 304 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 IFIT2P09913 472 aaKnown RBP6.25□□□□□ -1.41
VPS45-203ENST00000419023 CSF2RAP15509 400 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 ITGB8P26012 769 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 SMARCA1P28370 1054 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 COPB2P35606 906 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 MAP2K6P52564 334 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 TFCP2Q12800 502 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 G3BP1Q13283 466 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS45-203ENST00000419023 ATAT1Q5SQI0 421 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 TTC39AQ5SRH9 613 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 FAM102BQ5T8I3 360 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 THEMIS2Q5TEJ8 643 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 FNDC7Q5VTL7 733 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 IGFL4Q6B9Z1 124 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 CRIP3Q6Q6R5 217 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 RHOT2Q8IXI1 618 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 TCEAL8Q8IYN2 117 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 IL17RDQ8NFM7 739 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 OR56A1Q8NGH5 318 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 TBC1D15Q8TC07 691 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 AIFM3Q96NN9 605 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 PACSIN1Q9BY11 444 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 REXO4Q9GZR2 422 aaKnown RBP6.25□□□□□ -1.41
VPS45-203ENST00000419023 NRDE2Q9H7Z3 1164 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 KMT5AQ9NQR1 393 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 ANLNQ9NQW6 1124 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 PA2G4Q9UQ80 394 aaKnown RBP6.25□□□□□ -1.41
VPS45-203ENST00000419023 CDH23Q9H251 3354 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 ZNF521Q96K83 1311 aa6.25□□□□□ -1.41
VPS45-203ENST00000419023 PRUNE2Q8WUY3 3088 aa6.24□□□□□ -1.41
VPS45-203ENST00000419023 A0A0U1RQG5 324 aaPredicted RBP6.24□□□□□ -1.41
VPS45-203ENST00000419023 KIF28PB7ZC32 967 aa6.24□□□□□ -1.41
VPS45-203ENST00000419023 SMIM22K7EJ46 135 aa6.24□□□□□ -1.41
VPS45-203ENST00000419023 F2RL2O00254 374 aa6.24□□□□□ -1.41
VPS45-203ENST00000419023 SLC16A6O15403 523 aa6.24□□□□□ -1.41
VPS45-203ENST00000419023 HAUS5O94927 633 aa6.24□□□□□ -1.41
VPS45-203ENST00000419023 GNAI3P08754 354 aa6.24□□□□□ -1.41
VPS45-203ENST00000419023 SPATA31D3P0C874 917 aa6.24□□□□□ -1.41
VPS45-203ENST00000419023 C6P13671 934 aa6.24□□□□□ -1.41
VPS45-203ENST00000419023 TACR2P21452 398 aa6.24□□□□□ -1.41
VPS45-203ENST00000419023 LPOP22079 712 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms