RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SLC16A3O15427 465 aaKnown RBP19.03■□□□□ 0.64
VCP-202ENST00000417448 HUS1O60921 280 aa19.03■□□□□ 0.64
VCP-202ENST00000417448 CDH8P55286 799 aa19.03■□□□□ 0.64
VCP-202ENST00000417448 WDR72Q3MJ13 1102 aa19.03■□□□□ 0.64
VCP-202ENST00000417448 SCARA5Q6ZMJ2 495 aa19.03■□□□□ 0.64
VCP-202ENST00000417448 SLC41A1Q8IVJ1 513 aa19.03■□□□□ 0.64
VCP-202ENST00000417448 PGBD3Q8N328 593 aa19.03■□□□□ 0.64
VCP-202ENST00000417448 SEMA4DQ92854 862 aa19.03■□□□□ 0.64
VCP-202ENST00000417448 CEP63Q96MT8 703 aa19.03■□□□□ 0.64
VCP-202ENST00000417448 PKMYT1Q99640 499 aa19.03■□□□□ 0.64
VCP-202ENST00000417448 MRPL45Q9BRJ2 306 aaKnown RBP19.03■□□□□ 0.64
VCP-202ENST00000417448 ARMCX3Q9UH62 379 aaPredicted RBP19.03■□□□□ 0.64
VCP-202ENST00000417448 EIF4E1BA6NMX2 242 aaKnown RBP19.02■□□□□ 0.64
VCP-202ENST00000417448 SCAMP3O14828 347 aaKnown RBP19.02■□□□□ 0.64
VCP-202ENST00000417448 IKBKBO14920 756 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 AP5Z1O43299 807 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 KAT7O95251 611 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 PRB1P04280 392 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 HDCP19113 662 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 PIK3CAP42336 1068 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 RPL10AP62906 217 aaKnown RBP19.02■□□□□ 0.64
VCP-202ENST00000417448 ZNF33AQ06730 810 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 NFE2Q16621 373 aaPredicted RBP19.02■□□□□ 0.64
VCP-202ENST00000417448 ZNF699Q32M78 642 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 CBWD6Q4V339 395 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 CBWD3Q5JTY5 395 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 EOGTQ5NDL2 527 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 CBWD5Q5RIA9 395 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 SASS6Q6UVJ0 657 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 SLCO6A1Q86UG4 719 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 SMYD3Q9H7B4 428 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 GDAP2Q9NXN4 497 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 NME7Q9Y5B8 376 aa19.02■□□□□ 0.64
VCP-202ENST00000417448 LEFTY2O00292 366 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 ATP2C2O75185 946 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 PDGFRBP09619 1106 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 LMO2P25791 158 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 AP3M2P53677 418 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 TSPY1Q01534 308 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 BYSLQ13895 437 aaKnown RBP19.01■□□□□ 0.63
VCP-202ENST00000417448 HSF5Q4G112 596 aaPredicted RBP19.01■□□□□ 0.63
VCP-202ENST00000417448 IRF2BP1Q8IU81 584 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 NAXDQ8IW45 347 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 ADGRF2Q8IZF7 708 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 ADGRG2Q8IZP9 1017 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 SPATA18Q8TC71 538 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 KBTBD7Q8WVZ9 684 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 SLC35C1Q96A29 364 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 PNKPQ96T60 521 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 SDCBP2Q9H190 292 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 TMEM8AQ9HCN3 771 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 ABCB6Q9NP58 842 aa19.01■□□□□ 0.63
VCP-202ENST00000417448 GOLGA4Q13439 2230 aaKnown RBP19.01■□□□□ 0.63
VCP-202ENST00000417448 A0A0A0MRY4 1105 aa19■□□□□ 0.63
VCP-202ENST00000417448 GABRG2P18507 467 aa19■□□□□ 0.63
VCP-202ENST00000417448 KDSRQ06136 332 aa19■□□□□ 0.63
VCP-202ENST00000417448 SLC14A1Q13336 389 aa19■□□□□ 0.63
VCP-202ENST00000417448 DHCR24Q15392 516 aa19■□□□□ 0.63
VCP-202ENST00000417448 TPD52L1Q16890 204 aaPredicted RBP19■□□□□ 0.63
VCP-202ENST00000417448 PHTF2Q8N3S3 785 aa19■□□□□ 0.63
VCP-202ENST00000417448 APOBEC3GQ9HC16 384 aaKnown RBP19■□□□□ 0.63
VCP-202ENST00000417448 DDX43Q9NXZ2 648 aaKnown RBP19■□□□□ 0.63
VCP-202ENST00000417448 CALCOCO1Q9P1Z2 691 aa19■□□□□ 0.63
VCP-202ENST00000417448 GTF3C4Q9UKN8 822 aa19■□□□□ 0.63
VCP-202ENST00000417448 PCDHB9Q9Y5E1 797 aa19■□□□□ 0.63
VCP-202ENST00000417448 NAV2Q8IVL1 2488 aa19■□□□□ 0.63
VCP-202ENST00000417448 IGHV1OR15-9A0A0B4J2B8 117 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 CBFA2T3O75081 653 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 C1QL1O75973 258 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 APODP05090 189 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 EIF2DP41214 584 aaKnown RBP18.99■□□□□ 0.63
VCP-202ENST00000417448 MXI1P50539 228 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 MCCD1P59942 119 aaPredicted RBP18.99■□□□□ 0.63
VCP-202ENST00000417448 TNNC1P63316 161 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 TYRO3Q06418 890 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 ZNF667Q5HYK9 610 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 INTS6LQ5JSJ4 861 aaKnown RBP18.99■□□□□ 0.63
VCP-202ENST00000417448 KRT39Q6A163 491 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 RHBDF2Q6PJF5 856 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 TOGARAM2Q6ZUX3 1019 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 LIMS2Q7Z4I7 341 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 RABEPKQ7Z6M1 372 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 MARCH9Q86YJ5 346 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 TOP6BLQ8N6T0 577 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 TATDN2Q93075 761 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 SYAP1Q96A49 352 aaPredicted RBP18.99■□□□□ 0.63
VCP-202ENST00000417448 ACBD6Q9BR61 282 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 ARHGEF4Q9NR80 690 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 SAMSN1Q9NSI8 373 aaKnown RBP18.99■□□□□ 0.63
VCP-202ENST00000417448 HCN2Q9UL51 889 aa18.99■□□□□ 0.63
VCP-202ENST00000417448 CYSRT1A8MQ03 144 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 ASS1P00966 412 aaKnown RBP18.98■□□□□ 0.63
VCP-202ENST00000417448 SYPP08247 313 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 ATICP31939 592 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 USP46P62068 366 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 PSMC1P62191 440 aaKnown RBP18.98■□□□□ 0.63
VCP-202ENST00000417448 LRMPQ12912 555 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 ORC1Q13415 861 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 SGSM1Q2NKQ1 1148 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 KLHL40Q2TBA0 621 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms