RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 LMO3Q8TAP4 145 aa15.89■□□□□ 0.13
UBXN4-203ENST00000416538 ZC3H10Q96K80 434 aaKnown RBP15.89■□□□□ 0.13
UBXN4-203ENST00000416538 CNOT6LQ96LI5 555 aaKnown RBP15.89■□□□□ 0.13
UBXN4-203ENST00000416538 ZSWIM1Q9BR11 485 aa15.89■□□□□ 0.13
UBXN4-203ENST00000416538 ARRDC1-AS1Q9H2J1 176 aa15.89■□□□□ 0.13
UBXN4-203ENST00000416538 NAGPAQ9UK23 515 aa15.89■□□□□ 0.13
UBXN4-203ENST00000416538 TSPAN16Q9UKR8 245 aa15.89■□□□□ 0.13
UBXN4-203ENST00000416538 ADAMTS9Q9P2N4 1935 aa15.89■□□□□ 0.13
UBXN4-203ENST00000416538 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.88■□□□□ 0.13
UBXN4-203ENST00000416538 PSMA7O14818 248 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 CACNG3O60359 315 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 GRIA2P42262 883 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 DGKEP52429 567 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 MRPS21P82921 87 aaKnown RBP15.88■□□□□ 0.13
UBXN4-203ENST00000416538 PDE4CQ08493 712 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 ANO4Q32M45 955 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 TCEAL6Q6IPX3 200 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 TPGS1Q6ZTW0 290 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 TOGARAM2Q6ZUX3 1019 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 ANKRD52Q8NB46 1076 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 NELFBQ8WX92 580 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 TFAP2BQ92481 460 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 TCEAL3Q969E4 200 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 DHTKD1Q96HY7 919 aaPredicted RBP15.88■□□□□ 0.13
UBXN4-203ENST00000416538 ULBP1Q9BZM6 244 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 MARK1Q9P0L2 795 aa15.88■□□□□ 0.13
UBXN4-203ENST00000416538 CDV3Q9UKY7 258 aaKnown RBP15.88■□□□□ 0.13
UBXN4-203ENST00000416538 NYNRINQ9P2P1 1898 aaKnown RBP15.87■□□□□ 0.13
UBXN4-203ENST00000416538 DCDC2BA2VCK2 349 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 PRR5-ARHGAP8B1AHC4 643 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 NEDD8-MDP1E9PL57 170 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 O00370 1275 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 TRIM21P19474 475 aaKnown RBP15.87■□□□□ 0.13
UBXN4-203ENST00000416538 STX17P56962 302 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 ARHGAP8P85298 464 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 FOXK2Q01167 660 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 PKDCCQ504Y2 493 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 PLA2G2CQ5R387 149 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 EGFLAMQ63HQ2 1017 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 ARHGEF19Q8IW93 802 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 FRMD1Q8N878 549 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 OLIG1Q8TAK6 271 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 BHMTQ93088 406 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 CEP63Q96MT8 703 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 ACOX2Q99424 681 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 FAM124BQ9H5Z6 455 aaPredicted RBP15.87■□□□□ 0.13
UBXN4-203ENST00000416538 CLIC5Q9NZA1 410 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 RASAL2Q9UJF2 1139 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 DNMT3LQ9UJW3 386 aa15.87■□□□□ 0.13
UBXN4-203ENST00000416538 ASCC3Q8N3C0 2202 aaKnown RBP15.86■□□□□ 0.13
UBXN4-203ENST00000416538 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.86■□□□□ 0.13
UBXN4-203ENST00000416538 PRRT4C9JH25 899 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 RNF225M0QZC1 329 aaPredicted RBP15.86■□□□□ 0.13
UBXN4-203ENST00000416538 TYRP14679 529 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 MPLP40238 635 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 TKTL1P51854 596 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 ADIGQ0VDE8 80 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 EFEMP1Q12805 493 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 C10orf76Q5T2E6 689 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 PMS2CLQ68D20 193 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 ZNF276Q8N554 614 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 TTC39CQ8N584 583 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 UBA3Q8TBC4 463 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 LOXL4Q96JB6 756 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 MED15Q96RN5 788 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 BBS2Q9BXC9 721 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 CD248Q9HCU0 757 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 DNAJC17Q9NVM6 304 aaKnown RBP15.86■□□□□ 0.13
UBXN4-203ENST00000416538 PLK2Q9NYY3 685 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 DEC1Q9P2X7 70 aa15.86■□□□□ 0.13
UBXN4-203ENST00000416538 TPRP12270 2363 aaKnown RBP15.85■□□□□ 0.13
UBXN4-203ENST00000416538 LAMA1P25391 3075 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 SLC30A4O14863 429 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 XPO1O14980 1071 aaKnown RBP15.85■□□□□ 0.13
UBXN4-203ENST00000416538 PMM2O15305 246 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 HMBSP08397 361 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 CD19P15391 556 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 WASP42768 502 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 TNFRSF4P43489 277 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 PSEN1P49768 467 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 BCAT1P54687 386 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 YWHAGP61981 247 aaKnown RBP eCLIP15.85■□□□□ 0.13
UBXN4-203ENST00000416538 BST2Q10589 180 aaKnown RBP15.85■□□□□ 0.13
UBXN4-203ENST00000416538 CCDC40Q4G0X9 1142 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 SGO2Q562F6 1265 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 PM20D1Q6GTS8 502 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 GRAMD4Q6IC98 578 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 FOXR2Q6PJQ5 311 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 TRIM59Q8IWR1 403 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 ZNF513Q8N8E2 541 aaPredicted RBP15.85■□□□□ 0.13
UBXN4-203ENST00000416538 NETO1Q8TDF5 533 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 RLN3Q8WXF3 142 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 ERLEC1Q96DZ1 483 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 KREMEN1Q96MU8 473 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 UBXN6Q9BZV1 441 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 METTL14Q9HCE5 456 aaKnown RBP15.85■□□□□ 0.13
UBXN4-203ENST00000416538 HOOK1Q9UJC3 728 aaKnown RBP15.85■□□□□ 0.13
UBXN4-203ENST00000416538 LSM7Q9UK45 103 aaKnown RBP15.85■□□□□ 0.13
UBXN4-203ENST00000416538 PCDH15Q96QU1 1955 aa15.85■□□□□ 0.13
UBXN4-203ENST00000416538 A0A1W2PQF6 199 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms