RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 TBX18O95935 607 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 RALAP11233 206 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 RARGP13631 454 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 PLA2G4AP47712 749 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 ZNF423Q2M1K9 1284 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 UCMAQ8WVF2 138 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 WBP2Q969T9 261 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 ACOX2Q99424 681 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 KLF16Q9BXK1 252 aaPredicted RBP16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 SDCBP2Q9H190 292 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 CSNK1G1Q9HCP0 422 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 CACNA2D2Q9NY47 1150 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 NAGPAQ9UK23 515 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 KLK13Q9UKR3 277 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 WASF3Q9UPY6 502 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 SCML2Q9UQR0 700 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 PCDHA5Q9Y5H7 936 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 RAD54BQ9Y620 910 aa16.41■□□□□ 0.22
SBDSP1-201ENST00000415772 TNRC6BQ9UPQ9 1833 aaKnown RBP16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 A0A1W2PQF6 199 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 SRRM3A6NNA2 597 aaPredicted RBP16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 GFRA2O00451 464 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 CYP26A1O43174 497 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 CALUO43852 315 aaPredicted RBP16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 BEST1O76090 585 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 VNN1O95497 513 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 PSEN1P49768 467 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 ARID5AQ03989 594 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 EHHADHQ08426 723 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 TOGARAM2Q6ZUX3 1019 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 PIP4P1Q86T03 277 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 MIB1Q86YT6 1006 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 CRYBG2Q8N1P7 616 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 C12orf29Q8N999 325 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 ZMIZ2Q8NF64 920 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 PLEKHO2Q8TD55 490 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 CYFIP2Q96F07 1278 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 CDK5RAP1Q96SZ6 601 aaKnown RBP16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 NT5C1AQ9BXI3 368 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 CAPN10Q9HC96 672 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 CYLDQ9NQC7 956 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 PLK2Q9NYY3 685 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 MARK1Q9P0L2 795 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 ZNF510Q9Y2H8 683 aa16.4■□□□□ 0.22
SBDSP1-201ENST00000415772 PLXND1Q9Y4D7 1925 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 LAMA1P25391 3075 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 A0A1W2PQH9 124 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 SYNCRIPO60506 623 aaKnown RBP16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 NR3C1P04150 777 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 CYBBP04839 570 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 CHRM1P11229 460 aaPredicted RBP16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 ACADMP11310 421 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 KRT13P13646 458 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 CHKAP35790 457 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 DLG4P78352 724 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 SLC14A1Q13336 389 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 ZACNQ401N2 412 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 SLC41A1Q8IVJ1 513 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 GRAMD1CQ8IYS0 662 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 CHCHD4Q8N4Q1 142 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 OR2I1PQ8NGU4 316 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 TMC2Q8TDI7 906 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 GABRG3Q99928 467 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 DCLK3Q9C098 648 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 MIR1-1HGQ9H1L0 117 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 PRDM16Q9HAZ2 1276 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 HMGXB4Q9UGU5 601 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 SERTAD1Q9UHV2 236 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 RASAL2Q9UJF2 1139 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 NUDT5Q9UKK9 219 aa16.39■□□□□ 0.21
SBDSP1-201ENST00000415772 CNOT1A5YKK6 2376 aaKnown RBP16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 PRRT4C9JH25 899 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 PDXKO00764 312 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 MDM4O15151 490 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 HLA-DRAP01903 254 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 HMBSP08397 361 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 CD58P19256 250 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 CD6P30203 668 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 SLC8A3P57103 927 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 CLDN10P78369 228 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 COG7P83436 770 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 TRIP6Q15654 476 aaKnown RBP16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 RESP18Q5W5W9 173 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 SPOPLQ6IQ16 392 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 CLEC20AQ6ZU45 233 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 SV2AQ7L0J3 742 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 RSRC2Q7L4I2 434 aaKnown RBP16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 SLC9A9Q8IVB4 645 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 MRGPRX1Q96LB2 322 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 HNRNPABQ99729 332 aaKnown RBP16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 TMEM121BQ9BXQ6 578 aaPredicted RBP16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 ZDHHC5Q9C0B5 715 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 SLC6A17Q9H1V8 727 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 MMRN2Q9H8L6 949 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 PNPLA8Q9NP80 782 aa16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 DNAAF2Q9NVR5 837 aaKnown RBP16.38■□□□□ 0.21
SBDSP1-201ENST00000415772 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms