RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 ATG2AQ2TAZ0 1938 aa15.45■□□□□ 0.06
USP4-203ENST00000415188 C9IYK1 514 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 GPR182O15218 404 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 ALOX15BO15296 676 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 ERBB2P04626 1255 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 SETSIPP0DME0 302 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 IL9P15248 144 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 ARF4P18085 180 aaPredicted RBP15.44■□□□□ 0.06
USP4-203ENST00000415188 DNAJB1P25685 340 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 GRM5P41594 1212 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 MYO1EQ12965 1108 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 CAMK1Q14012 370 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 PCBP1Q15365 356 aaKnown RBP eCLIP15.44■□□□□ 0.06
USP4-203ENST00000415188 SLC10A6Q3KNW5 377 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 LCLAT1Q6UWP7 414 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 ARHGEF18Q6ZSZ5 1173 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 LRRC34Q8IZ02 419 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 CMASQ8NFW8 434 aaPredicted RBP15.44■□□□□ 0.06
USP4-203ENST00000415188 JOSD2Q8TAC2 188 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 DYDC1Q8WWB3 177 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 SGSM3Q96HU1 749 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 PRMT1Q99873 361 aaKnown RBP15.44■□□□□ 0.06
USP4-203ENST00000415188 FAM118BQ9BPY3 351 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 LMAN2LQ9H0V9 348 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 ADAMTS10Q9H324 1103 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 RSAD1Q9HA92 442 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 CD320Q9NPF0 282 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 RGS18Q9NS28 235 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 NKIRAS1Q9NYS0 192 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 HCSTQ9UBK5 93 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 PCDHB7Q9Y5E2 793 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 CAPN7Q9Y6W3 813 aa15.44■□□□□ 0.06
USP4-203ENST00000415188 TBKBP1A7MCY6 615 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 M0QYV0 167 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 SGK1O00141 431 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 TSPAN1O60635 241 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 ITGB1P05556 798 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 GSTA1P08263 222 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 BRAFP15056 766 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 GPD2P43304 727 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 ZNF143P52747 638 aaPredicted RBP15.43■□□□□ 0.06
USP4-203ENST00000415188 SNX16P57768 344 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 HYAL1Q12794 435 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 DSC3Q14574 896 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 COL19A1Q14993 1142 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 ANKRD20A8PQ5CZ79 823 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 TXNRD3NBQ6F5E7 133 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 PTCRAQ6ISU1 281 aaPredicted RBP15.43■□□□□ 0.06
USP4-203ENST00000415188 SLC24A5Q71RS6 500 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 CDR2LQ86X02 465 aaPredicted RBP15.43■□□□□ 0.06
USP4-203ENST00000415188 VSIG1Q86XK7 387 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 PPIL6Q8IXY8 311 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 KLHL23Q8NBE8 558 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 CKAP2Q8WWK9 683 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 KHSRPQ92945 711 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP4-203ENST00000415188 PABPC5Q96DU9 382 aaKnown RBP15.43■□□□□ 0.06
USP4-203ENST00000415188 C9orf72Q96LT7 481 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 CNPY3Q9BT09 278 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 KIAA1671Q9BY89 1806 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 DNAJC17Q9NVM6 304 aaKnown RBP15.43■□□□□ 0.06
USP4-203ENST00000415188 CLDND1Q9NY35 253 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 SLC24A2Q9UI40 661 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 AGAP1Q9UPQ3 857 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 NAALADL1Q9UQQ1 740 aa15.43■□□□□ 0.06
USP4-203ENST00000415188 A0A1B0GUA9 196 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 EXOC1LA0A1B0GW35 172 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 CCT8L1PA6NM43 557 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 H0YHG0 523 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 APOC4-APOC2K7ER74 178 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 DPYSL4O14531 572 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 TRUB2O95900 331 aaKnown RBP15.42■□□□□ 0.06
USP4-203ENST00000415188 APOC2P02655 101 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 VIMP08670 466 aaKnown RBP15.42■□□□□ 0.06
USP4-203ENST00000415188 FGFR1P11362 822 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 PECAM1P16284 738 aaPredicted RBP15.42■□□□□ 0.06
USP4-203ENST00000415188 GPD1P21695 349 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 CDH8P55286 799 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 OTUD4Q01804 1114 aaKnown RBP15.42■□□□□ 0.06
USP4-203ENST00000415188 PLCB3Q01970 1234 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 TFDP2Q14188 446 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 CCDC38Q502W7 563 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 PACS2Q86VP3 889 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 CCDC13Q8IYE1 715 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 ARFGAP1Q8N6T3 406 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 ACTL9Q8TC94 416 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 SPPL3Q8TCT6 385 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 NLRP7Q8WX94 980 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 PRCCQ92733 491 aaPredicted RBP15.42■□□□□ 0.06
USP4-203ENST00000415188 HEXIM2Q96MH2 286 aaKnown RBP15.42■□□□□ 0.06
USP4-203ENST00000415188 TWNKQ96RR1 684 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 NT5C1AQ9BXI3 368 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 EPHX3Q9H6B9 360 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 ZWILCHQ9H900 591 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 DPP3Q9NY33 737 aa15.42■□□□□ 0.06
USP4-203ENST00000415188 FARP1Q9Y4F1 1045 aaPredicted RBP15.42■□□□□ 0.06
USP4-203ENST00000415188 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.41■□□□□ 0.06
USP4-203ENST00000415188 CST8O60676 142 aa15.41■□□□□ 0.06
USP4-203ENST00000415188 DESP17661 470 aa15.41■□□□□ 0.06
USP4-203ENST00000415188 IL1R2P27930 398 aa15.41■□□□□ 0.06
USP4-203ENST00000415188 MIPP30301 263 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms