RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ROBO2Q9HCK4 1378 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TRIM43BA6NCK2 446 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 NCF1BA6NI72 391 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 MEIS3P2A8K0S8 358 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 NCF1CA8MVU1 366 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 NT5C1B-RDH14C9J2C7 533 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 KPNA5O15131 536 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ATP8B1O43520 1251 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 CA12O43570 354 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 AP1G1O43747 822 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 IDH3BO43837 385 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ERAL1O75616 437 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 CRTAPO75718 401 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 DNAJC8O75937 253 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 DDAH1O94760 285 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TMEM63AO94886 807 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 MT-CO1P00395 513 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ZBTB48P10074 688 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 GAAP10253 952 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 HNRNPLP14866 589 aaKnown RBP eCLIP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 GALP22466 123 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 IL32P24001 234 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 CHMP24386 653 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 BMI1P35226 326 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 RFC2P35250 354 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ID4P47928 161 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 GCLCP48506 637 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 PRIM2P49643 509 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 CPT1AP50416 773 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 GBX2P52951 348 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 POLR2GP62487 172 aaKnown RBP eCLIP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 YWHAZP63104 245 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ARF5P84085 180 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ARHGAP8P85298 464 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 OTUD4Q01804 1114 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TLE2Q04725 743 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 KDSRQ06136 332 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 GFPT1Q06210 699 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 AIMP1Q12904 312 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 MSLNQ13421 630 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 CAMK2DQ13557 499 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 CUL1Q13616 776 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 HABP2Q14520 560 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 MORF4L2Q15014 288 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SNX17Q15036 470 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TAF5Q15542 800 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SMAD1Q15797 465 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 MOGQ16653 247 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SEZ6Q53EL9 994 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 IGSF11Q5DX21 431 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 STXBP5Q5T5C0 1151 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 GRTP1Q5TC63 336 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 FOXB2Q5VYV0 432 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SHEQ5VZ18 495 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TBC1D9BQ66K14 1250 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 NCAPH2Q6IBW4 605 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TAF2Q6P1X5 1199 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ZPBP2Q6X784 338 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 R3HCC1LQ7Z5L2 792 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ADCK1Q86TW2 530 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 RFX6Q8HWS3 928 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 MCEMP1Q8IX19 187 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 FAM178BQ8IXR5 827 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SP8Q8IXZ3 490 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TMEM192Q8IY95 271 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 THNSL1Q8IYQ7 743 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TTC5Q8N0Z6 440 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 OXR1Q8N573 874 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 C10orf53Q8N6V4 93 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 USHBP1Q8N6Y0 703 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 CAGE1Q8TC20 777 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ENKURQ8TC29 256 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SYTL5Q8TDW5 730 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 PANK1Q8TE04 598 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 HTRA1Q92743 480 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 PEX13Q92968 403 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 USP7Q93009 1102 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 NKD1Q969G9 470 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TMIGD2Q96BF3 282 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TRIM43Q96BQ3 446 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 EFHD2Q96C19 240 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 RRP36Q96EU6 259 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TMEM41AQ96HV5 264 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 INTS4Q96HW7 963 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 MAELQ96JY0 434 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 EXOC2Q96KP1 924 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 NLRP4Q96MN2 994 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 PRICKLE1Q96MT3 831 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 HNRNPABQ99729 332 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SH3GL2Q99962 352 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 AIFM2Q9BRQ8 373 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 HAUS8Q9BT25 410 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 C9orf16Q9BUW7 83 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SGPP1Q9BX95 441 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 FAM129AQ9BZQ8 928 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 KRT23Q9C075 422 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SENP6Q9GZR1 1112 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ISCUQ9H1K1 167 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 KCNH6Q9H252 994 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms