RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CACNA2D2Q9NY47 1150 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 NFE2L3Q9Y4A8 694 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 RAD54BQ9Y620 910 aa12.85□□□□□ -0.35
LIMS2-210ENST00000413578 CELSR3Q9NYQ7 3312 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 SPTLC2O15270 562 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 SH3BP5O60239 455 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 CBFA2T3O75081 653 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 SYPP08247 313 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 CASP1P29466 404 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 ASPAP45381 313 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 AP3M2P53677 418 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 BIRC3Q13489 604 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 ACAP1Q15027 740 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 STK38Q15208 465 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 TRIP6Q15654 476 aaKnown RBP12.84□□□□□ -0.35
LIMS2-210ENST00000413578 KNOP1Q1ED39 458 aaKnown RBP12.84□□□□□ -0.35
LIMS2-210ENST00000413578 SCARA5Q6ZMJ2 495 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 TPGS1Q6ZTW0 290 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 CLEC20AQ6ZU45 233 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 UNC93AQ86WB7 457 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 IQUBQ8NA54 791 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 ADAMTS14Q8WXS8 1223 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 DNASE2BQ8WZ79 361 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 XPO6Q96QU8 1125 aaKnown RBP12.84□□□□□ -0.35
LIMS2-210ENST00000413578 FBXO44Q9H4M3 255 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 FAM124BQ9H5Z6 455 aaPredicted RBP12.84□□□□□ -0.35
LIMS2-210ENST00000413578 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 NMUR1Q9HB89 426 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 TLR8Q9NR97 1041 aaKnown RBP12.84□□□□□ -0.35
LIMS2-210ENST00000413578 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.84□□□□□ -0.35
LIMS2-210ENST00000413578 DMAC2Q9NW81 257 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 USP36Q9P275 1121 aaKnown RBP12.84□□□□□ -0.35
LIMS2-210ENST00000413578 WDR35Q9P2L0 1181 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 TFIP11Q9UBB9 837 aaKnown RBP12.84□□□□□ -0.35
LIMS2-210ENST00000413578 SUSD2Q9UGT4 822 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 SCML2Q9UQR0 700 aa12.84□□□□□ -0.35
LIMS2-210ENST00000413578 WASH3PC4AMC7 463 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 CYP26A1O43174 497 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 EXOC3O60645 756 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 PHACTR2O75167 634 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 PENKP01210 267 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-210ENST00000413578 FTH1P19P0C7X4 201 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 ATP5C1P36542 298 aaKnown RBP12.83□□□□□ -0.36
LIMS2-210ENST00000413578 DGKGP49619 791 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 NDST1P52848 882 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 MAP3K7CLP57077 242 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 GRIK2Q13002 908 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 ORC1Q13415 861 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 ZACNQ401N2 412 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 SDE2Q6IQ49 451 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 GLRX5Q86SX6 157 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 SLC9A9Q8IVB4 645 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 NAXDQ8IW45 347 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 ZNF276Q8N554 614 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 C12orf29Q8N999 325 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 FOXJ1Q92949 421 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 ERLEC1Q96DZ1 483 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 TWNKQ96RR1 684 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 MKRN2Q9H000 416 aaKnown RBP12.83□□□□□ -0.36
LIMS2-210ENST00000413578 NACA2Q9H009 215 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 BLZF1Q9H2G9 400 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 PNPLA8Q9NP80 782 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 SLC39A2Q9NP94 309 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 WSB2Q9NYS7 404 aaPredicted RBP12.83□□□□□ -0.36
LIMS2-210ENST00000413578 LSM7Q9UK45 103 aaKnown RBP12.83□□□□□ -0.36
LIMS2-210ENST00000413578 SLC27A6Q9Y2P4 619 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 GPSM3Q9Y4H4 160 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 APC2O95996 2303 aa12.83□□□□□ -0.36
LIMS2-210ENST00000413578 PVALEFA0A1B0GWK0 134 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 ZBTB24O43167 697 aaPredicted RBP12.82□□□□□ -0.36
LIMS2-210ENST00000413578 STX6O43752 255 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 CUTAO60888 179 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 YEATS4O95619 227 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 ASS1P00966 412 aaKnown RBP12.82□□□□□ -0.36
LIMS2-210ENST00000413578 ACO1P21399 889 aaKnown RBP12.82□□□□□ -0.36
LIMS2-210ENST00000413578 CD6P30203 668 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 RDXP35241 583 aaKnown RBP12.82□□□□□ -0.36
LIMS2-210ENST00000413578 DLG4P78352 724 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 INCA1Q0VD86 236 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 SCAPQ12770 1279 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 PLEKHG6Q3KR16 790 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 FUT11Q495W5 492 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 WDR45BQ5MNZ6 344 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 C1orf220Q5T0J3 134 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 FYB2Q5VWT5 728 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 CCNI2Q6ZMN8 369 aaPredicted RBP12.82□□□□□ -0.36
LIMS2-210ENST00000413578 SCD5Q86SK9 330 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 RBBP8NLQ8NC74 664 aaPredicted RBP12.82□□□□□ -0.36
LIMS2-210ENST00000413578 BAHD1Q8TBE0 780 aaPredicted RBP12.82□□□□□ -0.36
LIMS2-210ENST00000413578 TAF4BQ92750 862 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 HNRNPABQ99729 332 aaKnown RBP12.82□□□□□ -0.36
LIMS2-210ENST00000413578 ZDHHC5Q9C0B5 715 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 ITM2CQ9NQX7 267 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.36
LIMS2-210ENST00000413578 FAM49BQ9NUQ9 324 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 PCDHA5Q9Y5H7 936 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 STON1Q9Y6Q2 735 aa12.82□□□□□ -0.36
LIMS2-210ENST00000413578 A0A1W2PQH9 124 aa12.81□□□□□ -0.36
LIMS2-210ENST00000413578 KCNJ18B7U540 433 aa12.81□□□□□ -0.36
LIMS2-210ENST00000413578 MDM4O15151 490 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms