RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 KCNN4O15554 427 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 TNNC2P02585 160 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 HOXC6P09630 235 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 ASPHQ12797 758 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 TUBB3Q13509 450 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 BMPR2Q13873 1038 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 TARBP2Q15633 366 aaKnown RBP18.26■□□□□ 0.51
SDCBP-202ENST00000413219 UNC5AQ6ZN44 842 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 CYP4V2Q6ZWL3 525 aaPredicted RBP18.26■□□□□ 0.51
SDCBP-202ENST00000413219 CYS1Q717R9 158 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 ZBTB33Q86T24 672 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 MAP7D3Q8IWC1 876 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 ACO2Q99798 780 aaKnown RBP18.26■□□□□ 0.51
SDCBP-202ENST00000413219 SSX2IPQ9Y2D8 614 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 COMMD3-BMI1R4GMX3 469 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 DOCK5Q9H7D0 1870 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 IGKV6D-21A0A0A0MT36 114 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 RNASEH1O60930 286 aaKnown RBP18.26■□□□□ 0.51
SDCBP-202ENST00000413219 USP1O94782 785 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 C6orf222P0C671 652 aaPredicted RBP18.26■□□□□ 0.51
SDCBP-202ENST00000413219 MYL4P12829 197 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 L1CAMP32004 1257 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 ICAM3P32942 547 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 TFAMQ00059 246 aaKnown RBP18.26■□□□□ 0.51
SDCBP-202ENST00000413219 BTKQ06187 659 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 MTMR2Q13614 643 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 UBAP2LQ14157 1087 aaKnown RBP18.26■□□□□ 0.51
SDCBP-202ENST00000413219 PDK2Q15119 407 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 RABGAP1LQ5R372 815 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 RAPH1Q70E73 1250 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 PLD5Q8N7P1 536 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 ACMSDQ8TDX5 336 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 ANKRD36BP1Q96IX9 119 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 HAPLN3Q96S86 360 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 ADPGKQ9BRR6 497 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 SSC5DA1L4H1 1573 aa18.26■□□□□ 0.51
SDCBP-202ENST00000413219 HMX2A2RU54 273 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 TTLL13PA6NNM8 815 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 B4GALT4O60513 344 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 UGT1A9O60656 530 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 ZBED1O96006 694 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 GPD1P21695 349 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 PDE1BQ01064 536 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 GRM2Q14416 872 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 SYCP2LQ5T4T6 812 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 SNRNP48Q6IEG0 339 aaKnown RBP18.25■□□□□ 0.51
SDCBP-202ENST00000413219 PGM2L1Q6PCE3 622 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 C1orf228Q6PIY5 440 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 RASSF3Q86WH2 238 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 NCAPG2Q86XI2 1143 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 GSTCDQ8NEC7 633 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 PIP4K2CQ8TBX8 421 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 PIWIL2Q8TC59 973 aaKnown RBP18.25■□□□□ 0.51
SDCBP-202ENST00000413219 USP6NLQ92738 828 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 WNK4Q96J92 1243 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 EBNA1BP2Q99848 306 aaKnown RBP18.25■□□□□ 0.51
SDCBP-202ENST00000413219 EBF4Q9BQW3 602 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 EBF3Q9H4W6 596 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 UGT1A7Q9HAW7 530 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 UGT1A10Q9HAW8 530 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 UGT1A8Q9HAW9 530 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 NRBP2Q9NSY0 501 aa18.25■□□□□ 0.51
SDCBP-202ENST00000413219 TRPC5Q9UL62 973 aaPredicted RBP18.25■□□□□ 0.51
SDCBP-202ENST00000413219 UQCRBP14927 111 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 IRX4P78413 519 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 ADGRF2Q8IZF7 708 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 AGBL3Q8NEM8 1001 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 ZNF526Q8TF50 670 aaPredicted RBP18.24■□□□□ 0.51
SDCBP-202ENST00000413219 SIGLEC10Q96LC7 697 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 APOBEC2Q9Y235 224 aaKnown RBP18.24■□□□□ 0.51
SDCBP-202ENST00000413219 ZBTB12Q9Y330 459 aaPredicted RBP18.24■□□□□ 0.51
SDCBP-202ENST00000413219 PDLIM1O00151 329 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 APOL1O14791 398 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 PRPSAP2O60256 369 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 MICAL2O94851 1124 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 APRTP07741 180 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 PABPC4LP0CB38 370 aaKnown RBP18.24■□□□□ 0.51
SDCBP-202ENST00000413219 TPSB2P20231 275 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 RBL1P28749 1068 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 COPAP53621 1224 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 SP2Q02086 613 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 PTPN11Q06124 597 aaPredicted RBP18.24■□□□□ 0.51
SDCBP-202ENST00000413219 MED21Q13503 144 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 TPSAB1Q15661 275 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 FASTKD1Q53R41 847 aaKnown RBP18.24■□□□□ 0.51
SDCBP-202ENST00000413219 ZNF667Q5HYK9 610 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 FAM102AQ5T9C2 384 aaPredicted RBP18.24■□□□□ 0.51
SDCBP-202ENST00000413219 MAP3K21Q5TCX8 1036 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 SDCCAG8Q86SQ7 713 aaPredicted RBP18.24■□□□□ 0.51
SDCBP-202ENST00000413219 NME8Q8N427 588 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 SLC25A41Q8N5S1 370 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 PPP1R14CQ8TAE6 165 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 ACTRT2Q8TDY3 377 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 GCOM2Q9BZD3 368 aaPredicted RBP18.24■□□□□ 0.51
SDCBP-202ENST00000413219 KLHL4Q9C0H6 718 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 NXF1Q9UBU9 619 aaKnown RBP18.24■□□□□ 0.51
SDCBP-202ENST00000413219 PCDHA11Q9Y5I1 949 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 PARP14Q460N5 1801 aa18.24■□□□□ 0.51
SDCBP-202ENST00000413219 ARHGAP42A6NI28 874 aa18.23■□□□□ 0.51
SDCBP-202ENST00000413219 C2CD4BA6NLJ0 364 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms