RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 NAA30Q147X3 362 aaPredicted RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 SHHQ15465 462 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 SIX1Q15475 284 aaPredicted RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 TAZQ16635 292 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 ERCC6LQ2NKX8 1250 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 ODF2Q5BJF6 829 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 TFDP3Q5H9I0 405 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 ZFYVE27Q5T4F4 411 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 SCYL2Q6P3W7 929 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 MFSD7Q6UXD7 560 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 SPOCD1Q6ZMY3 1216 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 SPRED2Q7Z698 418 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 ADAT2Q7Z6V5 191 aaKnown RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 FAM131BQ86XD5 332 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 VSIG1Q86XK7 387 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 RCOR2Q8IZ40 523 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 ZDHHC14Q8IZN3 488 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 ARHGAP18Q8N392 663 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 CCDC185Q8N715 623 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 C12orf50Q8NA57 414 aaPredicted RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 CMASQ8NFW8 434 aaPredicted RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 ADAM32Q8TC27 787 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 DQX1Q8TE96 717 aaKnown RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 TSC1Q92574 1164 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 UBXN4Q92575 508 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 HSPH1Q92598 858 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 FBXO32Q969P5 355 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 RNF25Q96BH1 459 aaPredicted RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 TCF25Q9BQ70 676 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 TTLL2Q9BWV7 592 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 OSBPL8Q9BZF1 889 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 SMOC2Q9H3U7 446 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 FAM204AQ9H8W3 233 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 NMUR1Q9HB89 426 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 CYP4F11Q9HBI6 524 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 WDR6Q9NNW5 1121 aaKnown RBP6.93□□□□□ -1.3
VPS41-204ENST00000413141 ENTPD7Q9NQZ7 604 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 ABCC13Q9NSE7 274 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 COMMD8Q9NX08 183 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 OSER1Q9NX31 292 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 MAFFQ9ULX9 164 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 AP4E1Q9UPM8 1137 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 NR2E1Q9Y466 385 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 INSL5Q9Y5Q6 135 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 IRAK3Q9Y616 596 aa6.93□□□□□ -1.3
VPS41-204ENST00000413141 SYNJ2BP-COX16A0A087WUM0 186 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 C2orf71A6NGG8 1288 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 ZNF487B1APH4 448 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 IRAK2O43187 625 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 TGM5O43548 720 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 PHF2O75151 1096 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 CSPG5O95196 566 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 ADH1AP07327 375 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 CD48P09326 243 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 RHOXF2BP0C7M4 288 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 ZDHHC11BP0C7U3 371 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 KRT10P13645 584 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 DNAJB1P25685 340 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 CETN2P41208 172 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 AIF1P55008 147 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 CDH6P55285 790 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 ERVFC1P60507 584 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 UBE3AQ05086 875 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 ADCY2Q08462 1091 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 SCAPQ12770 1279 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 TAF10Q12962 218 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 NME3Q13232 169 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 EIF4EBP2Q13542 120 aaPredicted RBP6.92□□□□□ -1.3
VPS41-204ENST00000413141 DPYSL3Q14195 570 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 KRT81Q14533 505 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 PDK2Q15119 407 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 LLGL1Q15334 1064 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 DPYSL2Q16555 572 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 CYP1B1Q16678 543 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 CA9Q16790 459 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 BOLA3Q53S33 107 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 ZC3H12AQ5D1E8 599 aaKnown RBP6.92□□□□□ -1.3
VPS41-204ENST00000413141 ERMARDQ5T6L9 678 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 PLPP4Q5VZY2 271 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 BTBD8Q5XKL5 378 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 C8orf74Q6P047 294 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 MSANTD2Q6P1R3 559 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 TMC7Q7Z402 723 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 MON1AQ86VX9 555 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 PSTKQ8IV42 348 aaKnown RBP6.92□□□□□ -1.3
VPS41-204ENST00000413141 KLHL7Q8IXQ5 586 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 TCEAL8Q8IYN2 117 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 PRELID2Q8N945 189 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 KCTD6Q8NC69 237 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 FAM71BQ8TC56 605 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 SPPL3Q8TCT6 385 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 GIPC2Q8TF65 315 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 POF1BQ8WVV4 589 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 MAIP1Q8WWC4 291 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 NTAN1Q96AB6 310 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 TRMT2BQ96GJ1 504 aaKnown RBP6.92□□□□□ -1.3
VPS41-204ENST00000413141 SAMD11Q96NU1 681 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 KLHL5Q96PQ7 755 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 KRT12Q99456 494 aa6.92□□□□□ -1.3
VPS41-204ENST00000413141 RHOXF2Q9BQY4 288 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms