RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 KLKB1P03952 638 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 SP9P0CG40 484 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 UCHL3P15374 230 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 ZNF18P17022 549 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 GRSF1Q12849 480 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSB-203ENST00000413002 LRRC32Q14392 662 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 KLHL40Q2TBA0 621 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 KLHDC10Q6PID8 442 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 TPGS1Q6ZTW0 290 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 HTR3DQ70Z44 454 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 DHX40Q8IX18 779 aaKnown RBP13.77□□□□□ -0.21
SSB-203ENST00000413002 ARHGAP18Q8N392 663 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 WDTC1Q8N5D0 677 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 CD101Q93033 1021 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 BHMTQ93088 406 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 FAM81BQ96LP2 452 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 NAA15Q9BXJ9 866 aaKnown RBP13.77□□□□□ -0.21
SSB-203ENST00000413002 CNGB3Q9NQW8 809 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 TBC1D14Q9P2M4 693 aa13.77□□□□□ -0.21
SSB-203ENST00000413002 LIMA1Q9UHB6 759 aaKnown RBP13.77□□□□□ -0.21
SSB-203ENST00000413002 HELZP42694 1942 aaKnown RBP13.76□□□□□ -0.21
SSB-203ENST00000413002 E5RJQ4 531 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 TRIM24O15164 1050 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 MSI1O43347 362 aaKnown RBP13.76□□□□□ -0.21
SSB-203ENST00000413002 TPM2P07951 284 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 ADH5P11766 374 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 SEC13P55735 322 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 POLR2FP61218 127 aaKnown RBP13.76□□□□□ -0.21
SSB-203ENST00000413002 AMPD2Q01433 879 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 SATB1Q01826 763 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 UBXN1Q04323 297 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 PTK2Q05397 1052 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 KDSRQ06136 332 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 SYCP1Q15431 976 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 ANO4Q32M45 955 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 DGKKQ5KSL6 1271 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 FKBP15Q5T1M5 1219 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 TAF3Q5VWG9 929 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 C1orf228Q6PIY5 440 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 APTXQ7Z2E3 356 aaKnown RBP13.76□□□□□ -0.21
SSB-203ENST00000413002 TADA2BQ86TJ2 420 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 FMNL3Q8IVF7 1028 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 FAM71AQ8IYT1 594 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 RNF139Q8WU17 664 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 P2RY11Q96G91 374 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 HSFY1Q96LI6 401 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 PCMTD1Q96MG8 357 aaPredicted RBP13.76□□□□□ -0.21
SSB-203ENST00000413002 FUCA2Q9BTY2 467 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
SSB-203ENST00000413002 GANQ9H2C0 597 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 NLRC4Q9NPP4 1024 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 SPHK2Q9NRA0 654 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 LSM7Q9UK45 103 aaKnown RBP13.76□□□□□ -0.21
SSB-203ENST00000413002 MIA3Q5JRA6 1907 aa13.76□□□□□ -0.21
SSB-203ENST00000413002 CACNA1IQ9P0X4 2223 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 LGALS16A8MUM7 142 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 PAPSS1O43252 624 aaPredicted RBP13.75□□□□□ -0.21
SSB-203ENST00000413002 RNF40O75150 1001 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 ADH1CP00326 375 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 LTFP02788 710 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 CORO1AP31146 461 aaKnown RBP13.75□□□□□ -0.21
SSB-203ENST00000413002 MAGEA9P43362 315 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 ZNF165P49910 485 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 GOLGA8FQ08AF8 430 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 GOLGA8DPQ0D2H9 430 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 PDCLQ13371 301 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 TAF5Q15542 800 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 Q6ZNB5 142 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 ALYREFQ86V81 257 aaKnown RBP13.75□□□□□ -0.21
SSB-203ENST00000413002 DENND1CQ8IV53 801 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 ZNF276Q8N554 614 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 C1orf131Q8NDD1 294 aaKnown RBP13.75□□□□□ -0.21
SSB-203ENST00000413002 ANKRD20A12PQ8NF67 263 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 FAM149B1Q96BN6 582 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 PIWIL1Q96J94 861 aaKnown RBP13.75□□□□□ -0.21
SSB-203ENST00000413002 CDK5RAP1Q96SZ6 601 aaKnown RBP13.75□□□□□ -0.21
SSB-203ENST00000413002 SLC4A5Q9BY07 1137 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 ABCC13Q9NSE7 274 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 PLK2Q9NYY3 685 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 AGO1Q9UL18 857 aaKnown RBP13.75□□□□□ -0.21
SSB-203ENST00000413002 STRIP2Q9ULQ0 834 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 NAALADL1Q9UQQ1 740 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 SIK3Q9Y2K2 1263 aa13.75□□□□□ -0.21
SSB-203ENST00000413002 ZFHX2Q9C0A1 2572 aaPredicted RBP13.75□□□□□ -0.21
SSB-203ENST00000413002 NEDD8-MDP1E9PL57 170 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 F8VZ95 297 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 TEX33O43247 280 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 GFPT2O94808 682 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 FYNP06241 537 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 CYP11B1P15538 503 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 KRT9P35527 623 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 CXCL12P48061 93 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 RPL34P49207 117 aaKnown RBP13.74□□□□□ -0.21
SSB-203ENST00000413002 COG7P83436 770 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 GAD2Q05329 585 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 DMWDQ09019 674 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 NOP9Q86U38 636 aaKnown RBP13.74□□□□□ -0.21
SSB-203ENST00000413002 SCML4Q8N228 414 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 SPEM1Q8N4L4 309 aa13.74□□□□□ -0.21
SSB-203ENST00000413002 KIAA1958Q8N8K9 716 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms