RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 F9P00740 461 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 KRT10P13645 584 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 H2AFXP16104 143 aaPredicted RBP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 TFE3P19532 575 aaPredicted RBP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 GBP1P32455 592 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 OR1D2P34982 312 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 COILP38432 576 aaPredicted RBP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 VSNL1P62760 191 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 SLC7A5Q01650 507 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 NME3Q13232 169 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 KLF1Q13351 362 aaPredicted RBP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 TFDP2Q14188 446 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 SIX1Q15475 284 aaPredicted RBP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 DDR2Q16832 855 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 RAB6CQ53S08 254 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 BSPRYQ5W0U4 402 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 FBXO38Q6PIJ6 1188 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 RSPO2Q6UXX9 243 aaPredicted RBP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 CYP4V2Q6ZWL3 525 aaPredicted RBP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 BHLHA9Q7RTU4 235 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 VSIG1Q86XK7 387 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 CCDC105Q8IYK2 499 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 VPS52Q8N1B4 723 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 SCAMP5Q8TAC9 235 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 PHOSPHO2Q8TCD6 241 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 GRK7Q8WTQ7 553 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 CEP295NLQ96MC4 621 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 MAK16Q9BXY0 300 aaKnown RBP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 DCLK3Q9C098 648 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 RAB6CQ9H0N0 254 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 LRRC19Q9H756 370 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 COX16Q9P0S2 106 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 AFF4Q9UHB7 1163 aaKnown RBP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 AMACRQ9UHK6 382 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 AP4E1Q9UPM8 1137 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 SCML2Q9UQR0 700 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 UTP11Q9Y3A2 253 aaKnown RBP12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 NR2E1Q9Y466 385 aa12.1□□□□□ -0.47
SNRNP35-202ENST00000412157 C3orf70A6NLC5 250 aaPredicted RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 TTI1O43156 1089 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 TLL1O43897 1013 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 ENDOD1O94919 500 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 GAS8O95995 478 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 ATP2A2P16615 1042 aaKnown RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 RPL17P18621 184 aaKnown RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 YWHAQP27348 245 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 CA8P35219 290 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 TUFMP49411 452 aaKnown RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 GPR15P49685 360 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 EPHB4P54760 987 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 AIF1P55008 147 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 GUCY2DQ02846 1103 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 DUSP4Q13115 394 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 CCNG2Q16589 344 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 ARL13BQ3SXY8 428 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 EFHC2Q5JST6 749 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 SDHAF4Q5VUM1 108 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 SYPL2Q5VXT5 272 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 TPGS2Q68CL5 300 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 FAM109BQ6ICB4 259 aaPredicted RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 TMCO3Q6UWJ1 677 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 DENND5BQ6ZUT9 1274 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 BBS12Q6ZW61 710 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 FAM131BQ86XD5 332 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 PSTKQ8IV42 348 aaKnown RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 HERC6Q8IVU3 1022 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 GPR65Q8IYL9 337 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 TTC9BQ8N6N2 239 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 RNF139Q8WU17 664 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 C1orf54Q8WWF1 131 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 EDEM1Q92611 657 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 FBXO32Q969P5 355 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 NT5C3BQ969T7 300 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 PGAP3Q96FM1 320 aaPredicted RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 SPATA17Q96L03 361 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 CCDC114Q96M63 670 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 RAD9AQ99638 391 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 ZNF670Q9BS34 389 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 HERPUD2Q9BSE4 406 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 PCDH18Q9HCL0 1135 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 EPB41L5Q9HCM4 733 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 MRPL17Q9NRX2 175 aaKnown RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 TMEM51Q9NW97 253 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 GPATCH2LQ9NWQ4 482 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 DDIT4Q9NX09 232 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 CXXC1Q9P0U4 656 aaPredicted RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 PCYOX1Q9UHG3 505 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 FEZ2Q9UHY8 353 aaPredicted RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 DMGDHQ9UI17 866 aaKnown RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 SLC27A5Q9Y2P5 690 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 RWDD3Q9Y3V2 267 aa12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 MTCL1Q9Y4B5 1905 aaKnown RBP12.09□□□□□ -0.47
SNRNP35-202ENST00000412157 OBSL1O75147 1896 aa12.08□□□□□ -0.48
SNRNP35-202ENST00000412157 ZNF487B1APH4 448 aa12.08□□□□□ -0.48
SNRNP35-202ENST00000412157 ADAM12O43184 909 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms