RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 ALAS1P13196 640 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 FDXRP22570 491 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 PIK3CAP42336 1068 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 MAGEA10P43363 369 aaPredicted RBP5.36□□□□□ -1.55
LSM5-205ENST00000409952 HARS2P49590 506 aaKnown RBP5.36□□□□□ -1.55
LSM5-205ENST00000409952 KRTAP10-2P60368 255 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 PTP4A2Q12974 167 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 DUSP8Q13202 625 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 PDCLQ13371 301 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 DCTN2Q13561 401 aaKnown RBP5.36□□□□□ -1.55
LSM5-205ENST00000409952 PUM1Q14671 1186 aaKnown RBP eCLIP5.36□□□□□ -1.55
LSM5-205ENST00000409952 TBCCQ15814 346 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 ZNF529Q6P280 563 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 MFSD6Q6ZSS7 791 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 IKBIPQ70UQ0 350 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 PPP1R32Q7Z5V6 425 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 KCTD20Q7Z5Y7 419 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 ZFPM1Q8IX07 1006 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 KLHL36Q8N4N3 616 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 ANKRD44Q8N8A2 993 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 KCTD6Q8NC69 237 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 ZCCHC10Q8TBK6 192 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 HMGB4Q8WW32 186 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 CEP95Q96GE4 821 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 NUDT22Q9BRQ3 303 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 SSBP3Q9BWW4 388 aaPredicted RBP5.36□□□□□ -1.55
LSM5-205ENST00000409952 PHF7Q9BWX1 381 aaPredicted RBP5.36□□□□□ -1.55
LSM5-205ENST00000409952 SLC46A2Q9BY10 475 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 SEZ6LQ9BYH1 1024 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 KCNH6Q9H252 994 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 IL21RQ9HBE5 538 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 VEZTQ9HBM0 779 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 HCFC1R1Q9NWW0 138 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 PPP1R14DQ9NXH3 145 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 ADAM29Q9UKF5 820 aa5.36□□□□□ -1.55
LSM5-205ENST00000409952 KDM3AQ9Y4C1 1321 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 C17orf113A0A1B0GUU1 675 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 KIF28PB7ZC32 967 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 PI4K2BG5E9Z4 385 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 SH2B2O14492 632 aaPredicted RBP5.35□□□□□ -1.55
LSM5-205ENST00000409952 ZSCAN9O15535 394 aaPredicted RBP5.35□□□□□ -1.55
LSM5-205ENST00000409952 KIF20AO95235 890 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 RASAL1O95294 804 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 LARGE1O95461 756 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 CNR2P34972 360 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 EIF2DP41214 584 aaKnown RBP5.35□□□□□ -1.55
LSM5-205ENST00000409952 DPP6P42658 865 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 MSH2P43246 934 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 KCNQ1P51787 676 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 PTTG1IPP53801 180 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 EFEMP1Q12805 493 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 SF3A3Q12874 501 aaKnown RBP eCLIP5.35□□□□□ -1.551e-7■■■■□ 19.8
LSM5-205ENST00000409952 CSHL1Q14406 222 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 MGAT5BQ3V5L5 792 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 C1orf141Q5JVX7 400 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 UTP14CQ5TAP6 766 aaKnown RBP5.35□□□□□ -1.55
LSM5-205ENST00000409952 CYP20A1Q6UW02 462 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 UBE3BQ7Z3V4 1068 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 DNAJB7Q7Z6W7 309 aaPredicted RBP5.35□□□□□ -1.55
LSM5-205ENST00000409952 TRABD2AQ86V40 505 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 RHOT2Q8IXI1 618 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 ULK2Q8IYT8 1036 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 RTKN2Q8IZC4 609 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 LGI4Q8N135 537 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 C17orf53Q8N3J3 647 aaPredicted RBP5.35□□□□□ -1.55
LSM5-205ENST00000409952 FAM71DQ8N9W8 422 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 NUDT10Q8NFP7 164 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 ABHD5Q8WTS1 349 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 GCDHQ92947 438 aaPredicted RBP5.35□□□□□ -1.55
LSM5-205ENST00000409952 JAKMIP2Q96AA8 810 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 SH3KBP1Q96B97 665 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 NUDT11Q96G61 164 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 AJUBAQ96IF1 538 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 ZNF668Q96K58 619 aaPredicted RBP5.35□□□□□ -1.55
LSM5-205ENST00000409952 DESI2Q9BSY9 194 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 TMEM168Q9H0V1 697 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 RANBP17Q9H2T7 1088 aaKnown RBP5.35□□□□□ -1.55
LSM5-205ENST00000409952 RABEP2Q9H5N1 569 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 L2HGDHQ9H9P8 463 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 MTRRQ9UBK8 725 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 CROTQ9UKG9 612 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 GDAQ9Y2T3 454 aa5.35□□□□□ -1.55
LSM5-205ENST00000409952 C2orf78A6NCI8 922 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 NPIPB15A6NHN6 443 aaPredicted RBP5.34□□□□□ -1.55
LSM5-205ENST00000409952 CXorf49A8MYA2 514 aaPredicted RBP5.34□□□□□ -1.55
LSM5-205ENST00000409952 TULP3O75386 442 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 TOX4O94842 621 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 PLATP00750 562 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 AMHP03971 560 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 HMGCRP04035 888 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 ITGB3P05106 788 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 CYP21A2P08686 494 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 SNRPA1P09661 255 aaKnown RBP5.34□□□□□ -1.55
LSM5-205ENST00000409952 ATP5DP30049 168 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 BSGP35613 385 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 CASRP41180 1078 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 ETV4P43268 484 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 SATB1Q01826 763 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 KRT17Q04695 432 aa5.34□□□□□ -1.55
LSM5-205ENST00000409952 TBL3Q12788 808 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms