RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 CLEC4CQ8WTT0 213 aa11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 NDRG1Q92597 394 aaKnown RBP11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 C18orf8Q96DM3 657 aa11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 VCPIP1Q96JH7 1222 aa11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 HERPUD2Q9BSE4 406 aa11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 RHOBTB2Q9BYZ6 727 aa11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 METTL5Q9NRN9 209 aaKnown RBP11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 SLC38A7Q9NVC3 462 aa11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 PARVAQ9NVD7 372 aa11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 DKK3Q9UBP4 350 aa11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 DMGDHQ9UI17 866 aaKnown RBP11.18□□□□□ -0.62
LRRTM4-204ENST00000409884 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 DNAJC8O75937 253 aaPredicted RBP11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 CALB1P05937 261 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 GGCXP38435 758 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 PBX3P40426 434 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 LBX1P52954 281 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 BCAR1P56945 870 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 CTAG1AP78358 180 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 PKDCCQ504Y2 493 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 SH3PXD2AQ5TCZ1 1133 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 TRNP1Q6NT89 227 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 DCUN1D2Q6PH85 259 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 DSTYKQ6XUX3 929 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 ZNF554Q86TJ5 538 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 ZNF333Q96JL9 665 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 ANKRD27Q96NW4 1050 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 KRT12Q99456 494 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 MIS12Q9H081 205 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 HIPK3Q9H422 1215 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 TMEM30AQ9NV96 361 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 DDX43Q9NXZ2 648 aaKnown RBP11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 LNPEPQ9UIQ6 1025 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 MYBPHLA2RUH7 354 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 ENPP3O14638 875 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 PROSCO94903 275 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 NFKBIAP25963 317 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 CTNNA1P35221 906 aaKnown RBP11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 CD97P48960 835 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 TRADDQ15628 312 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 ANKRD20A8PQ5CZ79 823 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 SH2D4BQ5SQS7 431 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 FAM117BQ6P1L5 589 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 SLC2A7Q6PXP3 512 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 FAM183BPQ6ZVS7 135 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 PAQR9Q6ZVX9 377 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 TMCO2Q7Z6W1 182 aaPredicted RBP11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 CTU1Q7Z7A3 348 aaKnown RBP11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 ARFGAP1Q8N6T3 406 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 B3GALNT2Q8NCR0 500 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 ZNF473Q8WTR7 871 aaKnown RBP11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 RIN2Q8WYP3 895 aaPredicted RBP11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 TMEM209Q96SK2 561 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 ZNF518BQ9C0D4 1074 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 DDX47Q9H0S4 455 aaKnown RBP11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 MRPL47Q9HD33 250 aaKnown RBP11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 CRTAC1Q9NQ79 661 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 AASDHPPTQ9NRN7 309 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 COMMD8Q9NX08 183 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 ATP11BQ9Y2G3 1177 aa11.17□□□□□ -0.62
LRRTM4-204ENST00000409884 CDH23Q9H251 3354 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 ESYT3A0FGR9 886 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 HNRNPCP07910 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 CCDC159P0C7I6 412 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 KRT3P12035 628 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 CACNA2D1P54289 1103 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 SULT2A1Q06520 285 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 LRP8Q14114 963 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 PLEKHG4Q58EX7 1191 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 MDH1BQ5I0G3 518 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 FAM102AQ5T9C2 384 aaPredicted RBP11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 ZNF572Q7Z3I7 529 aaPredicted RBP11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 UNC93AQ86WB7 457 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 CRYBG2Q8N1P7 616 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 SLC35F5Q8WV83 523 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 PGBD4Q96DM1 585 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 PBKQ96KB5 322 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 B3GALT6Q96L58 329 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 NAP1L3Q99457 506 aaPredicted RBP11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 C2orf49Q9BVC5 232 aaPredicted RBP11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 SELENOOQ9BVL4 669 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 VCX3AQ9NNX9 186 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 ZNF148Q9UQR1 794 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 PRG3Q9Y2Y8 225 aaPredicted RBP11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 SCINQ9Y6U3 715 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 RANBP2P49792 3224 aaKnown RBP11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 PI4K2BG5E9Z4 385 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 PGRMC1O00264 195 aaKnown RBP11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 KRIT1O00522 736 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 GABRDO14764 452 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 TTI1O43156 1089 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 WARSP23381 471 aaKnown RBP11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 ITGB8P26012 769 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 VARSP26640 1264 aaKnown RBP11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 TUBP50607 506 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 KLC1Q07866 573 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 TUSC3Q13454 348 aa11.16□□□□□ -0.62
LRRTM4-204ENST00000409884 BFSP2Q13515 415 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms