RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TMEM59LQ9UK28 342 aa21.56■■□□□ 1.04
C4orf48-202ENST00000409860 NUDT5Q9UKK9 219 aa21.56■■□□□ 1.04
C4orf48-202ENST00000409860 STAP1Q9ULZ2 295 aa21.56■■□□□ 1.04
C4orf48-202ENST00000409860 NAALADL1Q9UQQ1 740 aa21.56■■□□□ 1.04
C4orf48-202ENST00000409860 PCDHA13Q9Y5I0 950 aa21.56■■□□□ 1.04
C4orf48-202ENST00000409860 NOTCH4Q99466 2003 aa21.56■■□□□ 1.04
C4orf48-202ENST00000409860 TBX18O95935 607 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 CYP1A2P05177 515 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 LAMP2P13473 410 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 IL9P15248 144 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 SP100P23497 879 aaPredicted RBP21.55■■□□□ 1.04
C4orf48-202ENST00000409860 WEE1P30291 646 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 NOS2P35228 1153 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 MATKP42679 507 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 SLC7A9P82251 487 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 CCZ1BP86790 482 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 CCZ1P86791 482 aaPredicted RBP21.55■■□□□ 1.04
C4orf48-202ENST00000409860 TXLNBQ8N3L3 684 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 ATXN2LQ8WWM7 1075 aaKnown RBP21.55■■□□□ 1.04
C4orf48-202ENST00000409860 SMARCD2Q92925 531 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 MCEEQ96PE7 176 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 SLC22A12Q96S37 553 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 CYP2S1Q96SQ9 504 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 RRN3Q9NYV6 651 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 MARCH2Q9P0N8 246 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 EPS15L1Q9UBC2 864 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 ZNF638Q14966 1978 aaKnown RBP21.55■■□□□ 1.04
C4orf48-202ENST00000409860 DOCK6Q96HP0 2047 aa21.55■■□□□ 1.04
C4orf48-202ENST00000409860 MDM4O15151 490 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 GJB6O95452 261 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 FLT3P36888 993 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 FAM78AQ5JUQ0 283 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 PPP1R15BQ5SWA1 713 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 SYPL2Q5VXT5 272 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 ARID3BQ8IVW6 561 aaPredicted RBP21.54■■□□□ 1.04
C4orf48-202ENST00000409860 EMC1Q8N766 993 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 ACRBPQ8NEB7 543 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 JOSD2Q8TAC2 188 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 DQX1Q8TE96 717 aaKnown RBP21.54■■□□□ 1.04
C4orf48-202ENST00000409860 ARHGEF26Q96DR7 871 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 RPGRIP1Q96KN7 1286 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 ASB16Q96NS5 453 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 RNF38Q9H0F5 515 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 SMOC2Q9H3U7 446 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 KIF9Q9HAQ2 790 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 ARHGAP26Q9UNA1 814 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 CPQQ9Y646 472 aa21.54■■□□□ 1.04
C4orf48-202ENST00000409860 REV3LO60673 3130 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 C2CD4DB7Z1M9 353 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 DPYSL4O14531 572 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 PDGFRAP16234 1089 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 DESP17661 470 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 SDC4P31431 198 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 KCNQ1P51787 676 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 POTEHQ6S545 545 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 KIAA1328Q86T90 577 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 DDX42Q86XP3 938 aaKnown RBP eCLIP21.53■■□□□ 1.04
C4orf48-202ENST00000409860 MIB1Q86YT6 1006 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 PLCD3Q8N3E9 789 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 RXFP2Q8WXD0 754 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 SERPINB11Q96P15 392 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 DDX23Q9BUQ8 820 aaKnown RBP21.53■■□□□ 1.04
C4orf48-202ENST00000409860 NUP85Q9BW27 656 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 FAM204AQ9H8W3 233 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 SMPD4Q9NXE4 827 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 CTTNBP2NLQ9P2B4 639 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 UVRAGQ9P2Y5 699 aa21.53■■□□□ 1.04
C4orf48-202ENST00000409860 DENND4AQ7Z401 1863 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 SLC12A8A0AV02 714 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 C2CD4BA6NLJ0 364 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 GPD1P21695 349 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 GBP1P32455 592 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 RFC1P35251 1148 aaPredicted RBP21.52■■□□□ 1.04
C4orf48-202ENST00000409860 SULT1E1P49888 294 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 KPNA1P52294 538 aaPredicted RBP21.52■■□□□ 1.04
C4orf48-202ENST00000409860 COG7P83436 770 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 MTSS1LQ765P7 747 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 TAC4Q86UU9 113 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 USP13Q92995 863 aaPredicted RBP21.52■■□□□ 1.04
C4orf48-202ENST00000409860 E2F7Q96AV8 911 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 DESI2Q9BSY9 194 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 SMG9Q9H0W8 520 aaKnown RBP21.52■■□□□ 1.04
C4orf48-202ENST00000409860 TRPV4Q9HBA0 871 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 TDP1Q9NUW8 608 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 PRKAG3Q9UGI9 489 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 SFMBT1Q9UHJ3 866 aa21.52■■□□□ 1.04
C4orf48-202ENST00000409860 REXO2Q9Y3B8 237 aaKnown RBP21.52■■□□□ 1.04
C4orf48-202ENST00000409860 PRAMEF12O95522 483 aa21.51■■□□□ 1.03
C4orf48-202ENST00000409860 TRUB2O95900 331 aaKnown RBP21.51■■□□□ 1.03
C4orf48-202ENST00000409860 VAV2P52735 878 aa21.51■■□□□ 1.03
C4orf48-202ENST00000409860 RPL7AP62424 266 aaKnown RBP21.51■■□□□ 1.03
C4orf48-202ENST00000409860 NNTQ13423 1086 aa21.51■■□□□ 1.03
C4orf48-202ENST00000409860 SLC25A52Q3SY17 297 aa21.51■■□□□ 1.03
C4orf48-202ENST00000409860 TRNP1Q6NT89 227 aa21.51■■□□□ 1.03
C4orf48-202ENST00000409860 RHOT2Q8IXI1 618 aa21.51■■□□□ 1.03
C4orf48-202ENST00000409860 CELF5Q8N6W0 485 aaKnown RBP21.51■■□□□ 1.03
C4orf48-202ENST00000409860 ZNF564Q8TBZ8 553 aaPredicted RBP21.51■■□□□ 1.03
C4orf48-202ENST00000409860 RFFLQ8WZ73 363 aa21.51■■□□□ 1.03
C4orf48-202ENST00000409860 CFAP57Q96MR6 1250 aa21.51■■□□□ 1.03
C4orf48-202ENST00000409860 NPY6RQ99463 290 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms