RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 MYH4Q9Y623 1939 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 MAPK13O15264 365 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 ASMTLO95671 621 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 PBX1P40424 430 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 PRMT2P55345 433 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 NT5DC3Q86UY8 548 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 CDKL3Q8IVW4 592 aaPredicted RBP11.82□□□□□ -0.52
SNX13-202ENST00000409604 PYROXD2Q8N2H3 581 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 ALG3Q92685 438 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 ST6GALNAC4Q9H4F1 302 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 POPDC2Q9HBU9 364 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 GMIPQ9P107 970 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 SIX4Q9UIU6 781 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 DNPEPQ9ULA0 475 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 STXBP5LQ9Y2K9 1186 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 NEU2Q9Y3R4 380 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 LOC102724159A0A0B4J2E5 919 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 CCDC195A0A1B0GUA6 201 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 A0A1W2PQH9 124 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 ITGB1P05556 798 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 GOT1P17174 413 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 HOXA11P31270 313 aaPredicted RBP11.82□□□□□ -0.52
SNX13-202ENST00000409604 ABCG1P45844 678 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 TUFMP49411 452 aaKnown RBP11.82□□□□□ -0.52
SNX13-202ENST00000409604 MAXP61244 160 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 PWP2Q15269 919 aaKnown RBP11.82□□□□□ -0.52
SNX13-202ENST00000409604 TAOK1Q7L7X3 1001 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 CIR1Q86X95 450 aaPredicted RBP11.82□□□□□ -0.52
SNX13-202ENST00000409604 C12orf56Q8IXR9 622 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 LRRC52Q8N7C0 313 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 ATP6V0D2Q8N8Y2 350 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 FBXO25Q8TCJ0 367 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 ATP6V1E2Q96A05 226 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 MCRS1Q96EZ8 462 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 FIZ1Q96SL8 496 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 EMILIN2Q9BXX0 1053 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 TMPRSS4Q9NRS4 437 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 CDK5RAP2Q96SN8 1893 aa11.82□□□□□ -0.52
SNX13-202ENST00000409604 C3orf70A6NLC5 250 aaPredicted RBP11.81□□□□□ -0.52
SNX13-202ENST00000409604 LSM8O95777 96 aaKnown RBP11.81□□□□□ -0.52
SNX13-202ENST00000409604 COILP38432 576 aaPredicted RBP11.81□□□□□ -0.52
SNX13-202ENST00000409604 CRADDP78560 199 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 FPGSQ05932 587 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 COBLL1Q53SF7 1204 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 FBXO46Q6PJ61 603 aaPredicted RBP11.81□□□□□ -0.52
SNX13-202ENST00000409604 ANKS3Q6ZW76 656 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 NT5DC4Q86YG4 428 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 SIX2Q9NPC8 291 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 TLK1Q9UKI8 766 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 CDH9Q9ULB4 789 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 GRXCR1A8MXD5 290 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 PHF2O75151 1096 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 PPP1R37O75864 691 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 GLI1P08151 1106 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 GLUD2P49448 558 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 PMS2P54278 862 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 COG7P83436 770 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 MOGSQ13724 837 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 C3orf20Q8ND61 904 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 SMC6Q96SB8 1091 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 SNRNP25Q9BV90 132 aaKnown RBP11.81□□□□□ -0.52
SNX13-202ENST00000409604 SDCBP2Q9H190 292 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 CARD9Q9H257 536 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 RBM22Q9NW64 420 aaKnown RBP eCLIP11.81□□□□□ -0.52
SNX13-202ENST00000409604 ANKRD65E5RJM6 399 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 WASP42768 502 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 SLC11A1P49279 550 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 ZNF268Q14587 947 aaPredicted RBP11.81□□□□□ -0.52
SNX13-202ENST00000409604 ERMARDQ5T6L9 678 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 MEI1Q5TIA1 1274 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 C4orf33Q8N1A6 199 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 TMEM86AQ8N2M4 240 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 TMA16Q96EY4 203 aaKnown RBP11.81□□□□□ -0.52
SNX13-202ENST00000409604 SNF8Q96H20 258 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 GKN1Q9NS71 199 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 OGFRQ9NZT2 677 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 COG5Q9UP83 839 aa11.81□□□□□ -0.52
SNX13-202ENST00000409604 ARHGAP42A6NI28 874 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 YJEFN3A6XGL0 299 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 E7ENQ6 273 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 ENPP3O14638 875 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 RHOCP08134 193 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 RPL9P32969 192 aaKnown RBP11.8□□□□□ -0.52
SNX13-202ENST00000409604 ATP5C1P36542 298 aaKnown RBP11.8□□□□□ -0.52
SNX13-202ENST00000409604 SLC5A3P53794 718 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 TRADDQ15628 312 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 MARCH8Q5T0T0 291 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 TADA2BQ86TJ2 420 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 PPP1R36Q96LQ0 422 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 LGMNQ99538 433 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 FBXO44Q9H4M3 255 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 INTS9Q9NV88 658 aaKnown RBP11.8□□□□□ -0.52
SNX13-202ENST00000409604 RASA4BC9J798 803 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 RASA4O43374 803 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 ATP5DP30049 168 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 FOXD4Q12950 439 aaPredicted RBP11.8□□□□□ -0.52
SNX13-202ENST00000409604 CCDC157Q569K6 752 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 HABP4Q5JVS0 413 aaKnown RBP11.8□□□□□ -0.52
SNX13-202ENST00000409604 CDC26Q8NHZ8 85 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 GABPB2Q8TAK5 448 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms