RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 UROC1Q96N76 676 aa21.52■■□□□ 1.04
USP39-203ENST00000409470 POPDC2Q9HBU9 364 aa21.52■■□□□ 1.04
USP39-203ENST00000409470 PPANQ9NQ55 473 aaKnown RBP21.52■■□□□ 1.04
USP39-203ENST00000409470 CFAP69A5D8W1 941 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 M0QYT0 321 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 CAPN9O14815 690 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 ALOX15BO15296 676 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 INHAP05111 366 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 MMP13P45452 471 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 MYLPFQ96A32 169 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 CSPG4P5Q96PW8 444 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 VPS37BQ9H9H4 285 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 MTMR10Q9NXD2 777 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 CTNNAL1Q9UBT7 734 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 XPO7Q9UIA9 1087 aaKnown RBP21.51■■□□□ 1.03
USP39-203ENST00000409470 DSEQ9UL01 958 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 FZD10Q9ULW2 581 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 SMAPO00193 183 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 NDUFAB1O14561 156 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 NRP1O14786 923 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 ARL4AP40617 200 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 CACNA2D1P54289 1103 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 PITX1P78337 314 aaPredicted RBP21.51■■□□□ 1.03
USP39-203ENST00000409470 GAD2Q05329 585 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 NME3Q13232 169 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 HFE2Q6ZVN8 426 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 ZNF598Q86UK7 904 aaKnown RBP21.51■■□□□ 1.03
USP39-203ENST00000409470 ZMIZ2Q8NF64 920 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 SLC2A13Q96QE2 648 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 NPY6RQ99463 290 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 RTP3Q9BQQ7 232 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 ACBD6Q9BR61 282 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 TSEN34Q9BSV6 310 aaKnown RBP21.51■■□□□ 1.03
USP39-203ENST00000409470 USP29Q9HBJ7 922 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 PRDM4Q9UKN5 801 aa21.51■■□□□ 1.03
USP39-203ENST00000409470 E7EVH7 732 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 CYP11A1P05108 521 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 YY1P25490 414 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 RBL1P28749 1068 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 DAOAP59103 153 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 SYPL2Q5VXT5 272 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 CAPN12Q6ZSI9 719 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 GPRIN1Q7Z2K8 1008 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 ANKMY2Q8IV38 441 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 PYROXD2Q8N2H3 581 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 ARHGEF2Q92974 986 aaKnown RBP21.5■■□□□ 1.03
USP39-203ENST00000409470 NT5C3BQ969T7 300 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 HMX1Q9NP08 348 aaPredicted RBP21.5■■□□□ 1.03
USP39-203ENST00000409470 CNGB3Q9NQW8 809 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 STARD7Q9NQZ5 370 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 RGS18Q9NS28 235 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 PAK5Q9P286 719 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 RSPH14Q9UHP6 348 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 NAALADL1Q9UQQ1 740 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 A0A1W2PQ45 241 aaPredicted RBP21.5■■□□□ 1.03
USP39-203ENST00000409470 A0A1W2PQY0 241 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 TCRBV7S3A2A0A539 114 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 BCLAF3A2AJT9 711 aaKnown RBP21.5■■□□□ 1.03
USP39-203ENST00000409470 USP17L7P0C7H9 530 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 PAX3P23760 479 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 SEC24CP53992 1094 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 DEUP1Q05D60 604 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 FNBP1LQ5T0N5 605 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 OTUD1Q5VV17 481 aaPredicted RBP21.5■■□□□ 1.03
USP39-203ENST00000409470 DCLRE1AQ6PJP8 1040 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 CD300LGQ6UXG3 332 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 EXOC3L1Q86VI1 746 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 CDKL3Q8IVW4 592 aaPredicted RBP21.5■■□□□ 1.03
USP39-203ENST00000409470 CCDC13Q8IYE1 715 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 RSPH1Q8WYR4 309 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 RHOBTB2Q9BYZ6 727 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 ZMYND15Q9H091 742 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 TMEM30AQ9NV96 361 aa21.5■■□□□ 1.03
USP39-203ENST00000409470 HTTP42858 3142 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.49■■□□□ 1.03
USP39-203ENST00000409470 EXOC1LA0A1B0GW35 172 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 YJEFN3A6XGL0 299 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 E7ENQ6 273 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 CDH16O75309 829 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 BANF1O75531 89 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 TMEM63AO94886 807 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 GNRH1P01148 92 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 CHN1P15882 459 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 GOT1P17174 413 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 CCT5P48643 541 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 GBE1Q04446 702 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 INTS6LQ5JSJ4 861 aaKnown RBP21.49■■□□□ 1.03
USP39-203ENST00000409470 RAB41Q5JT25 222 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 GLB1LQ6UWU2 654 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 PSTKQ8IV42 348 aaKnown RBP21.49■■□□□ 1.03
USP39-203ENST00000409470 SLC7A14Q8TBB6 771 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 PYROXD1Q8WU10 500 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 PHACTR1Q9C0D0 580 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 TBK1Q9UHD2 729 aa21.49■■□□□ 1.03
USP39-203ENST00000409470 SRRM3A6NNA2 597 aaPredicted RBP21.48■■□□□ 1.03
USP39-203ENST00000409470 M0QZQ0 153 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 AMPD1P23109 780 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 NR2C2P49116 596 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 LHX8Q68G74 356 aa21.48■■□□□ 1.03
USP39-203ENST00000409470 OVOS1Q6IE37 1185 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms