RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ACBD5Q5T8D3 534 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-205ENST00000409455 WDR78Q5VTH9 848 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 TXNRD3NBQ6F5E7 133 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 DNAJC24Q6P3W2 148 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 ANO5Q75V66 913 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 EEPD1Q7L9B9 569 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 ARPINQ7Z6K5 226 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 SLC26A11Q86WA9 606 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 NUDCD3Q8IVD9 361 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 FAM213AQ9BRX8 229 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 GBA2Q9HCG7 927 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-205ENST00000409455 ADAMTS6Q9UKP5 1117 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 HBS1LQ9Y450 684 aaKnown RBP16.02■□□□□ 0.15
LIMS2-205ENST00000409455 RPS6KL1Q9Y6S9 549 aa16.02■□□□□ 0.15
LIMS2-205ENST00000409455 UNCXA6NJT0 531 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 HNRNPDLO14979 420 aaKnown RBP16.01■□□□□ 0.15
LIMS2-205ENST00000409455 AP1G1O43747 822 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 EDNRBP24530 442 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 ICAM3P32942 547 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 SERPINB6P35237 376 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 SLC25A3Q00325 362 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 XKR9Q5GH70 373 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 KLC3Q6P597 504 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 B3GNT6Q6ZMB0 384 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 PLEKHG4BQ96PX9 1271 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 KMT5AQ9NQR1 393 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 SIRPGQ9P1W8 387 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 LCTP09848 1927 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 CCNT2O60583 730 aaKnown RBP16.01■□□□□ 0.15
LIMS2-205ENST00000409455 CELF2O95319 508 aaKnown RBP16.01■□□□□ 0.15
LIMS2-205ENST00000409455 HLA-DRAP01903 254 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 MMP8P22894 467 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 ENPEPQ07075 957 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 CUL2Q13617 745 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 PIGHQ14442 188 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-205ENST00000409455 TEX44Q53QW1 395 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 OLFML2BQ68BL8 750 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 SPOPLQ6IQ16 392 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 UGT2A3Q6UWM9 527 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 C15orf39Q6ZRI6 1047 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 CCDC60Q8IWA6 550 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-205ENST00000409455 CTAGE3PQ8IX95 158 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 RAB3IL1Q8TBN0 382 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 BTBD9Q96Q07 612 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 KIAA1217Q5T5P2 1943 aa16.01■□□□□ 0.15
LIMS2-205ENST00000409455 CSDE1O75534 798 aaKnown RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 CALB1P05937 261 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 PSAPP07602 524 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 WEE2P0C1S8 567 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 C6orf222P0C671 652 aaPredicted RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 TNNI1P19237 187 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 ACO1P21399 889 aaKnown RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 RPL5P46777 297 aaKnown RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 EPHB1P54762 984 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 WASHC5Q12768 1159 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 LGSNQ5TDP6 509 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 LMBRD2Q68DH5 695 aaPredicted RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 SLC39A4Q6P5W5 647 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 ABHD15Q6UXT9 468 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 IGDCC3Q8IVU1 814 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 PORCNQ9H237 461 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 ANKEF1Q9NU02 776 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 RHBDL2Q9NX52 303 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 CCDC160A6NGH7 325 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 PDHXO00330 501 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 CST8O60676 142 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 CLPTM1O96005 669 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 SNRPAP09012 282 aaKnown RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 MAGEA8P43361 318 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 COPAP53621 1224 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 HPCAP84074 193 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 NCOA4Q13772 614 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 KCTD2Q14681 263 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 GRAMD1BQ3KR37 738 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 RNF111Q6ZNA4 994 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 RBM44Q6ZP01 1051 aaKnown RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 ATP6V0A1Q93050 837 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 CCDC124Q96CT7 223 aaKnown RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 PRICKLE1Q96MT3 831 aaPredicted RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 MMP19Q99542 508 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 SLC13A1Q9BZW2 595 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 ZNF395Q9H8N7 513 aaPredicted RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 EFR3BQ9Y2G0 817 aa16■□□□□ 0.15
LIMS2-205ENST00000409455 MYH9P35579 1960 aaKnown RBP16■□□□□ 0.15
LIMS2-205ENST00000409455 hCG_2014768A0A024R1R8 64 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 CCL15-CCL14A0A0B4J2E2 113 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 SDR42E2A6NKP2 422 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 BTBD19C9JJ37 291 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 STRNO43815 780 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 STBD1O95210 358 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 FKBP1BP68106 108 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 FOLH1Q04609 750 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 CCNIQ14094 377 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 CCL15Q16663 113 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 ZACNQ401N2 412 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 HSP90AA5PQ58FG0 334 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 PPM1NQ8N819 430 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 C2orf69Q8N8R5 385 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 SHKBP1Q8TBC3 707 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 ZNF526Q8TF50 670 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms