RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 MTSS1O43312 755 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 RAMP2O60895 175 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 NBNO60934 754 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 DAB1O75553 588 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 RBP3P10745 1247 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 PLA2G4AP47712 749 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 MAP3K21Q5TCX8 1036 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 RAP1GAP2Q684P5 730 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 LNX1Q8TBB1 728 aaPredicted RBP8.75□□□□□ -1.01
SH3D19-202ENST00000409252 PYROXD1Q8WU10 500 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 TFB1MQ8WVM0 346 aaKnown RBP8.75□□□□□ -1.01
SH3D19-202ENST00000409252 BAP1Q92560 729 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 CASP10Q92851 521 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 ARHGEF26Q96DR7 871 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 MCRS1Q96EZ8 462 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 MAN1C1Q9NR34 630 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 BFARQ9NZS9 450 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 YIPF1Q9Y548 306 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 EDIL3O43854 480 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 RHOAP61586 193 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 C15orf59Q2T9L4 293 aaPredicted RBP8.75□□□□□ -1.01
SH3D19-202ENST00000409252 RAPH1Q70E73 1250 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 CCT6BQ92526 530 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 FUBP3Q96I24 572 aaKnown RBP eCLIP8.75□□□□□ -1.01
SH3D19-202ENST00000409252 WDR24Q96S15 920 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 SUDS3Q9H7L9 328 aaPredicted RBP8.75□□□□□ -1.01
SH3D19-202ENST00000409252 BRD9Q9H8M2 597 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 ATP13A1Q9HD20 1204 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 CFAP97Q9P2B7 532 aa8.75□□□□□ -1.01
SH3D19-202ENST00000409252 KIAA0100Q14667 2235 aaKnown RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 SLC38A8A6NNN8 435 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 ZBTB42B2RXF5 422 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 STBD1O95210 358 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 HOXD13P35453 343 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 CHKAP35790 457 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 SFSWAPQ12872 951 aaKnown RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 TIGD7Q6NT04 549 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 RETSATQ6NUM9 610 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 ZNF557Q8N988 423 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 SCYL1Q96KG9 808 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 ZMAT2Q96NC0 199 aaKnown RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 FAM107BQ9H098 131 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 PRR23AA6NEV1 266 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 SIGLEC16A6NMB1 481 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 HPDP32754 393 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 PRAMEP78395 509 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 TBX2Q13207 712 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 BYSLQ13895 437 aaKnown RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 SYCP2LQ5T4T6 812 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 PHF13Q86YI8 300 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 ATL2Q8NHH9 583 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 DEPDC1BQ8WUY9 529 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 CELF6Q96J87 481 aaKnown RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 MS4A14Q96JA4 679 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 SAYSD1Q9NPB0 183 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 ATP8A1Q9Y2Q0 1164 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 DUSP10Q9Y6W6 482 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 TBC1D3BA6NDS4 549 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 MEIS3P2A8K0S8 358 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 ATP9BO43861 1147 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 MIPP30301 263 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 CRELD2Q6UXH1 353 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 IPMKQ8NFU5 416 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 FAXDC2Q96IV6 333 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 FMO2Q99518 471 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 B3GNT5Q9BYG0 378 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 LHX5Q9H2C1 402 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 SFMBT1Q9UHJ3 866 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 ZNF185O15231 689 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 PHF2O75151 1096 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 ERBB2P04626 1255 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 KRT33BQ14525 404 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 MEA1Q16626 185 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 UPP1Q16831 310 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 FNDC3BQ53EP0 1204 aaKnown RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 TFDP3Q5H9I0 405 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 CFAP157Q5JU67 520 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 C11orf63Q6NUN7 778 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 SPOCD1Q6ZMY3 1216 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 PPP1R2P1Q96PQ5 205 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 LPIN3Q9BQK8 851 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 RHOBTB2Q9BYZ6 727 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 RRAGDQ9NQL2 400 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-202ENST00000409252 HMGXB4Q9UGU5 601 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 NAALADL1Q9UQQ1 740 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 CAPN6Q9Y6Q1 641 aa8.74□□□□□ -1.01
SH3D19-202ENST00000409252 RGS16O15492 202 aaPredicted RBP8.73□□□□□ -1.01
SH3D19-202ENST00000409252 PSMD3O43242 534 aa8.73□□□□□ -1.01
SH3D19-202ENST00000409252 S100BP04271 92 aaPredicted RBP8.73□□□□□ -1.01
SH3D19-202ENST00000409252 HOXD8P13378 290 aaPredicted RBP8.73□□□□□ -1.01
SH3D19-202ENST00000409252 LRPAP1P30533 357 aa8.73□□□□□ -1.01
SH3D19-202ENST00000409252 BMPR1AP36894 532 aa8.73□□□□□ -1.01
SH3D19-202ENST00000409252 ZNF143P52747 638 aaPredicted RBP8.73□□□□□ -1.01
SH3D19-202ENST00000409252 GEMIN4P57678 1058 aaKnown RBP8.73□□□□□ -1.01
SH3D19-202ENST00000409252 MAMLD1Q13495 774 aa8.73□□□□□ -1.01
SH3D19-202ENST00000409252 CLLU1OSQ5K130 101 aa8.73□□□□□ -1.01
SH3D19-202ENST00000409252 IZUMO3Q5VZ72 239 aa8.73□□□□□ -1.01
SH3D19-202ENST00000409252 ANKRD33Q7Z3H0 272 aa8.73□□□□□ -1.01
SH3D19-202ENST00000409252 SLC25A41Q8N5S1 370 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms