RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ZSCAN32Q9NX65 697 aa10.21□□□□□ -0.78
NIF3L1-202ENST00000409020 GMIPQ9P107 970 aa10.21□□□□□ -0.78
NIF3L1-202ENST00000409020 ZMYM5Q9UJ78 669 aa10.21□□□□□ -0.78
NIF3L1-202ENST00000409020 ARHGAP26Q9UNA1 814 aa10.21□□□□□ -0.78
NIF3L1-202ENST00000409020 FHOD1Q9Y613 1164 aa10.21□□□□□ -0.78
NIF3L1-202ENST00000409020 CPQQ9Y646 472 aa10.21□□□□□ -0.78
NIF3L1-202ENST00000409020 NCOR2Q9Y618 2525 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 SOBPA7XYQ1 873 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 CHURC1-FNTBB4DL54 471 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 LILRB5O75023 590 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 OLFM2O95897 454 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 MBD3O95983 291 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 BMP6P22004 513 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 ADORA2BP29275 332 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 PLA2G4AP47712 749 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 PXNP49023 591 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 FNTBP49356 437 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 GALK1P51570 392 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 CLCN6P51797 869 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 INCA1Q0VD86 236 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 IFT88Q13099 833 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 LRRC32Q14392 662 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 TSNAXIP1Q2TAA8 658 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 GAB4Q2WGN9 574 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 TMEM196Q5HYL7 178 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 ZNF658Q5TYW1 1059 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 HEATR6Q6AI08 1181 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 CC2D1AQ6P1N0 951 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 ZC3H14Q6PJT7 736 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 FILIP1Q7Z7B0 1213 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 MYLK4Q86YV6 388 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 SMARCE1Q969G3 411 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 FBXO32Q969P5 355 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 TNIP3Q96KP6 325 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 ZFRQ96KR1 1074 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 TRIM7Q9C029 511 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 TSPY26PQ9H489 355 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 TMEM8AQ9HCN3 771 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 DMAP1Q9NPF5 467 aaPredicted RBP10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 PCDHGA2Q9Y5H1 932 aa10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 ZNF638Q14966 1978 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-202ENST00000409020 GOLGA6L4A6NEF3 574 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 HMGB1P1B2RPK0 211 aaPredicted RBP10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 ZSCAN9O15535 394 aaPredicted RBP10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 COCHO43405 550 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 RNF40O75150 1001 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 KRT13P13646 458 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 YWHAQP27348 245 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 CXCL12P48061 93 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 IFNAR2P48551 515 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 CCR3P51677 355 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 MCCD1P59942 119 aaPredicted RBP10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 SLC7A9P82251 487 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 PDGFRLQ15198 375 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 EDRF1Q3B7T1 1238 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 ZNF394Q53GI3 561 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 ACBD5Q5T8D3 534 aaPredicted RBP10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 FBXO38Q6PIJ6 1188 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 CLEC20AQ6ZU45 233 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 TAX1BP1Q86VP1 789 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 ZC3H3Q8IXZ2 948 aaKnown RBP10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 KIAA2013Q8IYS2 634 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 CRYBG2Q8N1P7 616 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 SPEM1Q8N4L4 309 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 ATRIPQ8WXE1 791 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 TAF4BQ92750 862 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 SMARCD1Q96GM5 515 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 CEP295NLQ96MC4 621 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 NIF3L1Q9GZT8 377 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 LMBRD1Q9NUN5 540 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 OSER1Q9NX31 292 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 IL37Q9NZH6 218 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 CFAP97Q9P2B7 532 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 MAN1B1Q9UKM7 699 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 SMG5Q9UPR3 1016 aaKnown RBP10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 FRYQ5TBA9 3013 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 LAMA5O15230 3695 aa10.19□□□□□ -0.78
NIF3L1-202ENST00000409020 HHLA1C9JL84 531 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 TRDMT1O14717 391 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 CYP26A1O43174 497 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 CILPO75339 1184 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 TBX18O95935 607 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 PNMA6AP0CW24 399 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 VDRP11473 427 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 P4HA1P13674 534 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 RPL13P26373 211 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 MXI1P50539 228 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 DCAF17Q5H9S7 520 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 DGKKQ5KSL6 1271 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 KRT39Q6A163 491 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 C1orf228Q6PIY5 440 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 MAMSTRQ6ZN01 415 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 UNC93AQ86WB7 457 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 SLITRK1Q96PX8 696 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 HINFPQ9BQA5 517 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 EPC1Q9H2F5 836 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 CSNK1G1Q9HCP0 422 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 ST7Q9NRC1 585 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 RMND1Q9NWS8 449 aa10.18□□□□□ -0.78
NIF3L1-202ENST00000409020 HELZP42694 1942 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms