RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 GADL1Q6ZQY3 521 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 VSIG1Q86XK7 387 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 PALM2Q8IXS6 379 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 ADGRF2Q8IZF7 708 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 CCDC110Q8TBZ0 833 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 RAB3IPQ96QF0 476 aaPredicted RBP10.23□□□□□ -0.77
MSH2-202ENST00000406134 ASB7Q9H672 318 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 RAB6BQ9NRW1 208 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 PRMT7Q9NVM4 692 aaPredicted RBP10.23□□□□□ -0.77
MSH2-202ENST00000406134 PLLPQ9Y342 182 aa10.23□□□□□ -0.77
MSH2-202ENST00000406134 MDM4O15151 490 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 GSC2O15499 205 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 KCNN4O15554 427 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 ADCY6O43306 1168 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 LGALS2P05162 132 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 HOXA11P31270 313 aaPredicted RBP10.22□□□□□ -0.77
MSH2-202ENST00000406134 GJA5P36382 358 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 SERPINB4P48594 390 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 ATP11AP98196 1134 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 GOLGA7BQ2TAP0 167 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 BNIPLQ7Z465 357 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 NLRC5Q86WI3 1866 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 CCDC33Q8N5R6 958 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 SH3TC2Q8TF17 1288 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 FAM172AQ8WUF8 416 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 HEXIM2Q96MH2 286 aaKnown RBP10.22□□□□□ -0.77
MSH2-202ENST00000406134 OLFM3Q96PB7 478 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 NMUR2Q9GZQ4 415 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 SMARCAD1Q9H4L7 1026 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 ELP3Q9H9T3 547 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 KCNH4Q9UQ05 1017 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 NPTXRO95502 500 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 TGM2P21980 687 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 SLC26A2P50443 739 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 TUBP50607 506 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 BMPR2Q13873 1038 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 CRYMQ14894 314 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 SOWAHAQ2M3V2 549 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 CMPK2Q5EBM0 449 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 ACSBG2Q5FVE4 666 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 SCUBE3Q8IX30 993 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 KBTBD7Q8WVZ9 684 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 FAM136AQ96C01 138 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 CFAP36Q96G28 342 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 TAS2R1Q9NYW7 299 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 ITGA11Q9UKX5 1188 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 TRIM49D1C9J1S8 452 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 ZNF286BP0CG31 522 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 TMEM132DQ14C87 1099 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 SETDB1Q15047 1291 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 DPYSL2Q16555 572 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 FAM47CQ5HY64 1035 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 WASHC2DQ5SRD0 308 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 NCBP2-AS2Q69YL0 99 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 ALKAL1Q6UXT8 129 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 SLC26A11Q86WA9 606 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 GPC2Q8N158 579 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 CCDC185Q8N715 623 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 GIMAP7Q8NHV1 300 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 NRDE2Q9H7Z3 1164 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 DPP3Q9NY33 737 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 MOCS1Q9NZB8 636 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 TUBGCP4Q9UGJ1 667 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 C2CD2Q9Y426 696 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 TANC1Q9C0D5 1861 aa10.22□□□□□ -0.77
MSH2-202ENST00000406134 NYNRINQ9P2P1 1898 aaKnown RBP10.22□□□□□ -0.77
MSH2-202ENST00000406134 A0A0G2JND7 137 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.21□□□□□ -0.77
MSH2-202ENST00000406134 A6NHS1 94 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 ZNF487B1APH4 448 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 NOP56O00567 594 aaKnown RBP10.21□□□□□ -0.77
MSH2-202ENST00000406134 AMHP03971 560 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 TXNP10599 105 aaKnown RBP10.21□□□□□ -0.77
MSH2-202ENST00000406134 RARBP10826 455 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 PTDSS1P48651 473 aaKnown RBP10.21□□□□□ -0.77
MSH2-202ENST00000406134 IGBP1P78318 339 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 KRT72Q14CN4 511 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 ANO7Q6IWH7 933 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 MAVSQ7Z434 540 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 OTUD5Q96G74 571 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 PGLYRP2Q96PD5 576 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 KCTD15Q96SI1 283 aaPredicted RBP10.21□□□□□ -0.77
MSH2-202ENST00000406134 ZNF670Q9BS34 389 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 DGKIO75912 1065 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 RNF8O76064 485 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 MT-ND3P03897 115 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 GCKP35557 465 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 SLC6A3Q01959 620 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 NIPAL4Q0D2K0 466 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 HIC1Q14526 733 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 TTC39BQ5VTQ0 682 aaPredicted RBP10.21□□□□□ -0.77
MSH2-202ENST00000406134 LIMS2Q7Z4I7 341 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 MCUQ8NE86 351 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 ARNTL2Q8WYA1 636 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 TTC17Q96AE7 1141 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 BTBD10Q9BSF8 475 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 RNF19AQ9NV58 838 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 PAK5Q9P286 719 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 ARMCX1Q9P291 453 aa10.21□□□□□ -0.77
MSH2-202ENST00000406134 GCATO75600 419 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms