RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 PDGFRBP09619 1106 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 ADORA2BP29275 332 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 AXLP30530 894 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 GNL1P36915 607 aaPredicted RBP16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 GBE1Q04446 702 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 SLC10A2Q12908 348 aaPredicted RBP16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 XKR4Q5GH76 650 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 ZNF618Q5T7W0 954 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 PRPF39Q86UA1 669 aaKnown RBP16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 CCDC110Q8TBZ0 833 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 LRRN4Q8WUT4 740 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 C10orf82Q8WW14 230 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 THOC1Q96FV9 657 aaKnown RBP16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 SERAC1Q96JX3 654 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 APOL6Q9BWW8 343 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 VPS11Q9H270 941 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 C12orf65Q9H3J6 166 aaKnown RBP16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 ETNK1Q9HBU6 452 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 TTLL3Q9Y4R7 772 aa16.86■□□□□ 0.29
CDKN1A-203ENST00000405375 HGSO14964 777 aaPredicted RBP16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 ECM2O94769 699 aaPredicted RBP16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 UNC5CO95185 931 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 MT-ND3P03897 115 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 APRTP07741 180 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 DHRS4L1P0CG22 281 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 ALADP13716 330 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 MAGEA3P43357 314 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 SLC18A2Q05940 514 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 FAAP100Q0VG06 881 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 MCUQ8NE86 351 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 PTPN18Q99952 460 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 MAGEB5Q9BZ81 275 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 MYLK2Q9H1R3 596 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 DHX35Q9H5Z1 703 aaKnown RBP16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 VGLL3A8MV65 326 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 INHBAP08476 426 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 KCNE1P15382 129 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 ETV4P43268 484 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 NEK3P51956 506 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 SNX17Q15036 470 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 SLC45A4Q5BKX6 768 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 PNMA8AQ86V59 439 aaPredicted RBP16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 CDKL3Q8IVW4 592 aaPredicted RBP16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 DNAJB3Q8WWF6 145 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 HSFY1Q96LI6 401 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 ZNF560Q96MR9 790 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 PARK7Q99497 189 aaKnown RBP16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 SLC5A4Q9NY91 659 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 KLK14Q9P0G3 267 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 AP4E1Q9UPM8 1137 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 PIN4Q9Y237 131 aaKnown RBP16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 IKBKGQ9Y6K9 419 aa16.85■□□□□ 0.29
CDKN1A-203ENST00000405375 IQCA1LA6NCM1 817 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 SLC15A5A6NIM6 579 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 GCATO75600 419 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 FAM155BO75949 473 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 LCP1P13796 627 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 NR2C2P49116 596 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 SOX4Q06945 474 aaPredicted RBP16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 GPR162Q16538 588 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 PRAMEF19Q5SWL8 479 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 UBXN11Q5T124 520 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 C4orf22Q6V702 233 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 ZNF534Q76KX8 674 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 SLC26A11Q86WA9 606 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 KIF2BQ8N4N8 673 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 CCDC185Q8N715 623 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 SLC2A14Q8TDB8 520 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 ERP27Q96DN0 273 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 APOPT1Q96IL0 206 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 CSPG4P5Q96PW8 444 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 KCTD15Q96SI1 283 aaPredicted RBP16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 NOD2Q9HC29 1040 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 ZC3H7BQ9UGR2 993 aaKnown RBP16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 USP3Q9Y6I4 520 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 ZNF236Q9UL36 1845 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 LPXNO60711 386 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 TOMM70O94826 608 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 METTL18O95568 372 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 ZFXP17010 805 aaPredicted RBP16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 PRKCHP24723 683 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 PNPLA4P41247 253 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 ACADSBP45954 432 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 SETDB1Q15047 1291 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 LRRC39Q96DD0 335 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 CFAP36Q96G28 342 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 LRRC37BQ96QE4 947 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 TRIM33Q9UPN9 1127 aa16.84■□□□□ 0.29
CDKN1A-203ENST00000405375 KRT16P08779 473 aa16.83■□□□□ 0.28
CDKN1A-203ENST00000405375 TKTP29401 623 aaKnown RBP16.83■□□□□ 0.28
CDKN1A-203ENST00000405375 TAF6P49848 677 aa16.83■□□□□ 0.28
CDKN1A-203ENST00000405375 MFSD10Q14728 455 aa16.83■□□□□ 0.28
CDKN1A-203ENST00000405375 SEPT7Q16181 437 aaKnown RBP16.83■□□□□ 0.28
CDKN1A-203ENST00000405375 LRRC6Q86X45 466 aa16.83■□□□□ 0.28
CDKN1A-203ENST00000405375 VPS52Q8N1B4 723 aa16.83■□□□□ 0.28
CDKN1A-203ENST00000405375 APPL2Q8NEU8 664 aa16.83■□□□□ 0.28
CDKN1A-203ENST00000405375 PTPRN2Q92932 1015 aa16.83■□□□□ 0.28
CDKN1A-203ENST00000405375 QKIQ96PU8 341 aaKnown RBP eCLIP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms