RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 STRIP1Q5VSL9 837 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 C1orf228Q6PIY5 440 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 RBM44Q6ZP01 1051 aaKnown RBP16.09■□□□□ 0.17
ATG4B-205ENST00000404914 TMC7Q7Z402 723 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 KCTD6Q8NC69 237 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 CISHQ9NSE2 258 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 DNAAF2Q9NVR5 837 aaKnown RBP16.09■□□□□ 0.17
ATG4B-205ENST00000404914 FBXO40Q9UH90 709 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 CDH22Q9UJ99 828 aa16.09■□□□□ 0.17
ATG4B-205ENST00000404914 SCAF8Q9UPN6 1271 aaKnown RBP16.09■□□□□ 0.17
ATG4B-205ENST00000404914 APOC4-APOC2K7ER74 178 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 MCF2LO15068 1137 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 CCNT2O60583 730 aaKnown RBP16.08■□□□□ 0.16
ATG4B-205ENST00000404914 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
ATG4B-205ENST00000404914 STAM2O75886 525 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 KRT37O76014 449 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 APOC2P02655 101 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 KRT3P12035 628 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 SERPINB6P35237 376 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 JAK3P52333 1124 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 TBL3Q12788 808 aaKnown RBP16.08■□□□□ 0.16
ATG4B-205ENST00000404914 MTERF2Q49AM1 385 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 CCDC60Q8IWA6 550 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-205ENST00000404914 NME8Q8N427 588 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 C17orf75Q9HAS0 396 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 USP29Q9HBJ7 922 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 PNPOQ9NVS9 261 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 SBF1O95248 1867 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 KIAA1217Q5T5P2 1943 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 SIN3BO75182 1162 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 ENTPD3O75355 529 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 TSHRP16473 764 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 ADORA2AP29274 412 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 MIPP30301 263 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 CHN2P52757 468 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 ANKRD20A4Q4UJ75 823 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 TEDDM1Q5T9Z0 273 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 OLFML2BQ68BL8 750 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 PHTF2Q8N3S3 785 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 PRICKLE1Q96MT3 831 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-205ENST00000404914 PHF12Q96QT6 1004 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 IMPG2Q9BZV3 1241 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 RHBDL2Q9NX52 303 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 EMCNQ9ULC0 261 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 INPP5FQ9Y2H2 1132 aa16.08■□□□□ 0.16
ATG4B-205ENST00000404914 SF3B1O75533 1304 aaKnown RBP eCLIP16.08■□□□□ 0.167e-7■■■■□ 20.8
ATG4B-205ENST00000404914 NDC80O14777 642 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 ITGAXP20702 1163 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 TBXAS1P24557 533 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-205ENST00000404914 WASHC5Q12768 1159 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 UNC5AQ6ZN44 842 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 FRMD7Q6ZUT3 714 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 TRIM74Q86UV6 250 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 TRIM73Q86UV7 250 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 DEFB107AQ8IZN7 70 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 TTC13Q8NBP0 860 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 TFB1MQ8WVM0 346 aaKnown RBP16.07■□□□□ 0.16
ATG4B-205ENST00000404914 CGRRF1Q99675 332 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 PDCD2LQ9BRP1 358 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 MTMR12Q9C0I1 747 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 SERPINA10Q9UK55 444 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 PENKP01210 267 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-205ENST00000404914 L1CAMP32004 1257 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 GRIA1P42261 906 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 ROR1Q01973 937 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 FASTKD1Q53R41 847 aaKnown RBP16.07■□□□□ 0.16
ATG4B-205ENST00000404914 FAM160B2Q86V87 743 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 CCDC33Q8N5R6 958 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 CPXM1Q96SM3 734 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 RMDN3Q96TC7 470 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 MSTO1Q9BUK6 570 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 MRIQ9BWK5 157 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 PNPLA8Q9NP80 782 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 FEM1BQ9UK73 627 aa16.07■□□□□ 0.16
ATG4B-205ENST00000404914 A0A1B0GTW7 788 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 E2F8A0AVK6 867 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 ADCY6O43306 1168 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 RAD17O75943 681 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 PCSK6P29122 969 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 RAP1GAPP47736 663 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 SNAPC2Q13487 334 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 NADK2Q4G0N4 442 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.06■□□□□ 0.16
ATG4B-205ENST00000404914 LENG1Q96BZ8 264 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-205ENST00000404914 TMCO1Q9UM00 188 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 EFR3BQ9Y2G0 817 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 PCDHA10Q9Y5I2 948 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 H7C0C1 242 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 PIK3R2O00459 728 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 ATG7O95352 703 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 ASS1P00966 412 aaKnown RBP16.06■□□□□ 0.16
ATG4B-205ENST00000404914 FAM200BP0CF97 657 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 FGF3P11487 239 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-205ENST00000404914 PRKCHP24723 683 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 ATP5OP48047 213 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 COPAP53621 1224 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 KRT76Q01546 638 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 MBLAC2Q68D91 279 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 LCA5Q86VQ0 697 aa16.06■□□□□ 0.16
ATG4B-205ENST00000404914 OXCT2Q9BYC2 517 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms