RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 NECTIN3Q9NQS3 549 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 EHD3Q9NZN3 535 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 USP22Q9UPT9 525 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 DRG1Q9Y295 367 aaKnown RBP5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 PPLO60437 1756 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 SPATA31E1Q6ZUB1 1445 aa5.82□□□□□ -1.48
HMGB3P19-201ENST00000403971 TMEM131LA2VDJ0 1609 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 TONSLQ96HA7 1378 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 ADGRB3O60242 1522 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 GOLGA6L3A6NEY3 463 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 NPC1O15118 1278 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 TNFRSF6BO95407 300 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 ZFXP17010 805 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 KRT4P19013 534 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 TACR2P21452 398 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 TGM1P22735 817 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 PCSK6P29122 969 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 EPHA3P29320 983 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 MCM7P33993 719 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 ADRA1BP35368 520 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 SEC24CP53992 1094 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 GPS1Q13098 491 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 MPP3Q13368 585 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 SPARCL1Q14515 664 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 MAPKAPK3Q16644 382 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 SLC5A9Q2M3M2 681 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 CCDC38Q502W7 563 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 ZNF618Q5T7W0 954 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 ANO1Q5XXA6 986 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 ABLIM2Q6H8Q1 611 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 MZT2AQ6P582 158 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 PEG10Q86TG7 708 aaKnown RBP5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 SMC5Q8IY18 1101 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 SOCS4Q8WXH5 440 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 PBKQ96KB5 322 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 ALG8Q9BVK2 526 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 VN1R3Q9BXE9 311 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 RIMKLBQ9ULI2 386 aa5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 SCAF8Q9UPN6 1271 aaKnown RBP5.81□□□□□ -1.48
HMGB3P19-201ENST00000403971 UBR1Q8IWV7 1749 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 KIAA1210Q9ULL0 1709 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 ZNF142P52746 1687 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 PIP5K1CO60331 668 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 SKAP2O75563 359 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 EIF3JO75822 258 aaKnown RBP5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 ESRRBO95718 433 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 CSTBP04080 98 aaKnown RBP5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 ELFN1P0C7U0 828 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 MTHFSP49914 203 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 TIRAPP58753 221 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 BLOC1S1P78537 153 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 MRPS35P82673 323 aaKnown RBP5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 ABHD18Q0P651 414 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 BLMHQ13867 455 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 DHX8Q14562 1220 aaKnown RBP5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 ZACNQ401N2 412 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 GORABQ5T7V8 394 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 HECTD2Q5U5R9 776 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 MYCT1Q8N699 235 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 SUPT20HQ8NEM7 779 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 ACTRT2Q8TDY3 377 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 ZNF668Q96K58 619 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 COQ10AQ96MF6 247 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 INO80BQ9C086 356 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 MYH16Q9H6N6 1097 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 EPS8L2Q9H6S3 715 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 LRFN1Q9P244 771 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 SLC27A6Q9Y2P4 619 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 UGGT1Q9NYU2 1555 aa5.8□□□□□ -1.48
HMGB3P19-201ENST00000403971 NLRP1Q9C000 1473 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 LINC00473A8K010 186 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 EXOC5O00471 708 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 TRIM38O00635 465 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 ASNA1O43681 348 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 CCNT2O60583 730 aaKnown RBP5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 SNX2O60749 519 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 USP1O94782 785 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 SRGAP2BP0DMP2 458 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 JUPP14923 745 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 RBL1P28749 1068 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 HTR7P34969 479 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 HALP42357 657 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 AVPR1BP47901 424 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 PDE1AP54750 535 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 FSTL1Q12841 308 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 BMPR2Q13873 1038 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 CYP1B1Q16678 543 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 TEDDM1Q5T9Z0 273 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 ULK2Q8IYT8 1036 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 LRRC71Q8N4P6 559 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 GRAMD1AQ96CP6 724 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 ZDHHC12Q96GR4 267 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 RMDN3Q96TC7 470 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 PRPF18Q99633 342 aaKnown RBP5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 CHMP4AQ9BY43 222 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 TMOD4Q9NZQ9 345 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 LRIT1Q9P2V4 623 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 GRHPRQ9UBQ7 328 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 ST3GAL5Q9UNP4 418 aa5.79□□□□□ -1.48
HMGB3P19-201ENST00000403971 MORC2Q9Y6X9 1032 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms