RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CCDC126Q96EE4 140 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 ACOT9Q9Y305 439 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 CBX4O00257 560 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 BGNP21810 368 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 PLIN5Q00G26 463 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 VSIG10LQ86VR7 867 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 NCAM2O15394 837 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 VGLL4Q14135 290 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 SPASTQ9UBP0 616 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 FAM237AA0A1B0GTK4 181 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 TTLL13PA6NNM8 815 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 DNALI1O14645 258 aaPredicted RBP18.73■□□□□ 0.59
COL18A1-204ENST00000400337 FAM153BP0C7A2 387 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 CNTFP26441 200 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 SOAT1P35610 550 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 RHOAP61586 193 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 EVX2Q03828 476 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 FAM153CQ494X1 144 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 DAB2IPQ5VWQ8 1189 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 SDE2Q6IQ49 451 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 ADAM32Q8TC27 787 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 ECSITQ9BQ95 431 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 PORCNQ9H237 461 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 FAM153AQ9UHL3 310 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 ITM2BQ9Y287 266 aa18.73■□□□□ 0.59
COL18A1-204ENST00000400337 TBC1D4O60343 1298 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 PAEPP09466 180 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 AMPD1P23109 780 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 MGAT5Q09328 741 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 CNDP1Q96KN2 507 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 SPATA16Q9BXB7 569 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 ZNF556Q9HAH1 456 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 DOLKQ9UPQ8 538 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 H2AFYO75367 372 aaKnown RBP18.72■□□□□ 0.59
COL18A1-204ENST00000400337 ACVR2BQ13705 512 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 POU6F1Q14863 301 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 DEFB128Q7Z7B8 93 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 YME1L1Q96TA2 773 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 WDR18Q9BV38 432 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 UBXN6Q9BZV1 441 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 GPAMQ9HCL2 828 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 AVENQ9NQS1 362 aaPredicted RBP18.72■□□□□ 0.59
COL18A1-204ENST00000400337 TPST1O60507 370 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 BMP6P22004 513 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 MAP3K10Q02779 954 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 CSHL1Q14406 222 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 ZNF410Q86VK4 478 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 ZDHHC17Q8IUH5 632 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 ZNF333Q96JL9 665 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 PURBQ96QR8 312 aaKnown RBP18.72■□□□□ 0.59
COL18A1-204ENST00000400337 PRPF18Q99633 342 aaKnown RBP18.72■□□□□ 0.59
COL18A1-204ENST00000400337 RBBP8Q99708 897 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 YIPF2Q9BWQ6 316 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 NOD2Q9HC29 1040 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 PIH1D1Q9NWS0 290 aaKnown RBP18.72■□□□□ 0.59
COL18A1-204ENST00000400337 CES2O00748 559 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 KLRC4O43908 158 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 CPA3P15088 417 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 PECAM1P16284 738 aaPredicted RBP18.72■□□□□ 0.59
COL18A1-204ENST00000400337 DNAJB2P25686 324 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 SCNN1BP51168 640 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 TAF2Q6P1X5 1199 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 ILDR2Q71H61 639 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 TMC3Q7Z5M5 1100 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 PTAR1Q7Z6K3 402 aaPredicted RBP18.72■□□□□ 0.59
COL18A1-204ENST00000400337 TFAP2DQ7Z6R9 452 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 THUMPD3Q9BV44 507 aaKnown RBP18.72■□□□□ 0.59
COL18A1-204ENST00000400337 MRIQ9BWK5 157 aa18.72■□□□□ 0.59
COL18A1-204ENST00000400337 C16orf96A6NNT2 1141 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 CRTAMO95727 393 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 TPH1P17752 444 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 TFE3P19532 575 aaPredicted RBP18.71■□□□□ 0.59
COL18A1-204ENST00000400337 IL17AQ16552 155 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 KBTBD12Q3ZCT8 623 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 FUT11Q495W5 492 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 SEL1L3Q68CR1 1132 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 WDR59Q6PJI9 974 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 DEFB106AQ8N104 65 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 DNPEPQ9ULA0 475 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 PRR23AA6NEV1 266 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 LGALS2P05162 132 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 GALNTL6Q49A17 601 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 TMEM154Q6P9G4 183 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 CREG2Q8IUH2 290 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 FAR2Q96K12 515 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 ENTPD7Q9NQZ7 604 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 SFMBT1Q9UHJ3 866 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 AKR1A1P14550 325 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 RAB27AP51159 221 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 HIST2H2ACQ16777 129 aaPredicted RBP18.71■□□□□ 0.59
COL18A1-204ENST00000400337 MARC1Q5VT66 337 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 HIST2H2AA3Q6FI13 130 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 C11orf96Q7Z7L8 435 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 MTDHQ86UE4 582 aaKnown RBP18.71■□□□□ 0.59
COL18A1-204ENST00000400337 CLPBQ9H078 707 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 ACP6Q9NPH0 428 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 ARIH2O95376 493 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 THRAP10827 490 aa18.71■□□□□ 0.59
COL18A1-204ENST00000400337 EIF4BP23588 611 aaKnown RBP18.71■□□□□ 0.59
COL18A1-204ENST00000400337 MIPP30301 263 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms