RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 TMCO5AQ8N6Q1 288 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SLC4A11Q8NBS3 891 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZNF280CQ8ND82 737 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 OR52K1Q8NGK4 314 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SLC5A11Q8WWX8 675 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 TBC1D5Q92609 795 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 KLRG1Q96E93 195 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 RBM17Q96I25 401 aaKnown RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 MAGEB10Q96LZ2 347 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 NOX5Q96PH1 765 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 CRAMP1Q96RY5 1269 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SLC9A7Q96T83 725 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 P2RX7Q99572 595 aaKnown RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 TXN2Q99757 166 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ITPAQ9BY32 194 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 REXO4Q9GZR2 422 aaKnown RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 BRD8Q9H0E9 1235 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZNF214Q9UL59 606 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 PACSIN2Q9UNF0 486 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SNX13Q9Y5W8 968 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 SNED1Q8TER0 1413 aa6.51□□□□□ -1.37
TRAPPC13-202ENST00000399438 LTBP1Q14766 1721 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 NUDT19A8MXV4 375 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 ERVH48-1M5A8F1 160 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 PSMA7O14818 248 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 NPR1P16066 1061 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 H2AFXP16104 143 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 ARHGAP25P42331 645 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 USP11P51784 963 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZNF41P51814 821 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 FRG1Q14331 258 aaKnown RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 NBPF12Q5TAG4 269 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 FCRLBQ6BAA4 426 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 CDC42EP5Q6NZY7 148 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZCCHC12Q6PEW1 402 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 MIGA2Q7L4E1 593 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 MDM1Q8TC05 714 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 PTPRN2Q92932 1015 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 SENP6Q9GZR1 1112 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 GBP3Q9H0R5 595 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 TDRD3Q9H7E2 651 aaKnown RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 C6orf50Q9HD87 102 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 SNTG1Q9NSN8 517 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 APEX2Q9UBZ4 518 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 TCP10L2B9ZVM9 353 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 H3BQF6 201 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 H7BY64 318 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 CDK2AP1O14519 115 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 CSF1P09603 554 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 PBX1P40424 430 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 RGS2P41220 211 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 EPS15P42566 896 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 CCR9P51686 369 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 ADCY7P51828 1080 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 PSMC6P62333 389 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 HERVK_113P62684 666 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 VSNL1P62760 191 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 MC1RQ01726 317 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 PTCRAQ6ISU1 281 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 STYK1Q6J9G0 422 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 WDR59Q6PJI9 974 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 TAOK1Q7L7X3 1001 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 MB21D1Q8N884 522 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 ANKRD20A12PQ8NF67 263 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 CAGE1Q8TC20 777 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 MASTLQ96GX5 879 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 PNMA5Q96PV4 448 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 TMEM165Q9HC07 324 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 MID1IP1Q9NPA3 183 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 MTMR4Q9NYA4 1195 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 RWDD2AQ9UIY3 292 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 TUBD1Q9UJT1 453 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 BRCA1P38398 1863 aaKnown RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 PHLPP2Q6ZVD8 1323 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 WDR64B1ANS9 1081 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 TGM5O43548 720 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 DLX3O60479 287 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 TMIGD3P0DMS9 266 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 CKBP12277 381 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 LONP1P36776 959 aaKnown RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 NNMTP40261 264 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 C2orf54Q08AI8 447 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 TTC19Q6DKK2 380 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 TANGO2Q6ICL3 276 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 TTI2Q6NXR4 508 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 RRAGAQ7L523 313 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 KRT25Q7Z3Z0 450 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 FOXJ1Q92949 421 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 GAL3ST3Q96A11 431 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 LRRC45Q96CN5 670 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 ABHD17AQ96GS6 310 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 APIPQ96GX9 242 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 FAM84AQ96KN4 292 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 MMS19Q96T76 1030 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 SEMA3GQ9NS98 782 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 CACNG4Q9UBN1 327 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 FZD1Q9UP38 647 aa6.5□□□□□ -1.37
TRAPPC13-202ENST00000399438 DNAH12Q6ZR08 3092 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 BRCA2P51587 3418 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 TRIM43BA6NCK2 446 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms