RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 TMEM35BQ8NCS4 154 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 HSFY1Q96LI6 401 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 AGPAT1Q99943 283 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 ULBP1Q9BZM6 244 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 C8orf33Q9H7E9 229 aaPredicted RBP26.69■■□□□ 1.86
U2AF1-203ENST00000398137 RBM12Q9NTZ6 932 aaKnown RBP26.69■■□□□ 1.86
U2AF1-203ENST00000398137 TDP1Q9NUW8 608 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 SEPT11Q9NVA2 429 aaKnown RBP26.69■■□□□ 1.86
U2AF1-203ENST00000398137 ZMYM5Q9UJ78 669 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 SCML2Q9UQR0 700 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 FRYLO94915 3013 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 DCHS1Q96JQ0 3298 aa26.69■■□□□ 1.86
U2AF1-203ENST00000398137 FAM92AA1XBS5 289 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 SOBPA7XYQ1 873 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 MFAP3LO75121 409 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 LSM8O95777 96 aaKnown RBP26.68■■□□□ 1.86
U2AF1-203ENST00000398137 USP17L7P0C7H9 530 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 SKILP12757 684 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 PRKCIP41743 596 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 KPNA1P52294 538 aaPredicted RBP26.68■■□□□ 1.86
U2AF1-203ENST00000398137 NAA35Q5VZE5 725 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 RALGPS2Q86X27 583 aaPredicted RBP26.68■■□□□ 1.86
U2AF1-203ENST00000398137 STK32AQ8WU08 396 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 MRPS31Q92665 395 aaKnown RBP26.68■■□□□ 1.86
U2AF1-203ENST00000398137 SYN2Q92777 582 aaPredicted RBP26.68■■□□□ 1.86
U2AF1-203ENST00000398137 MSANTD3Q96H12 275 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 CYP2S1Q96SQ9 504 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 HAUS4Q9H6D7 363 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 GKN1Q9NS71 199 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 TRPM5Q9NZQ8 1165 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 USP3Q9Y6I4 520 aa26.68■■□□□ 1.86
U2AF1-203ENST00000398137 OTOGLQ3ZCN5 2332 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 HELZP42694 1942 aaKnown RBP26.67■■□□□ 1.86
U2AF1-203ENST00000398137 ABL1P00519 1130 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 CDH5P33151 784 aaPredicted RBP26.67■■□□□ 1.86
U2AF1-203ENST00000398137 AVPR1AP37288 418 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 NOMO3P69849 1222 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 TDRD12Q587J7 1177 aaKnown RBP26.67■■□□□ 1.86
U2AF1-203ENST00000398137 TRIM68Q6AZZ1 485 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 ZC3H14Q6PJT7 736 aaKnown RBP26.67■■□□□ 1.86
U2AF1-203ENST00000398137 CCDC186Q7Z3E2 898 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 PDZD8Q8NEN9 1154 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 OVCA2Q8WZ82 227 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 NDRG1Q92597 394 aaKnown RBP26.67■■□□□ 1.86
U2AF1-203ENST00000398137 NOX5Q96PH1 765 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 CPXM1Q96SM3 734 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 PCDHB18PQ96TA0 734 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 SYT11Q9BT88 431 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 SLC4A5Q9BY07 1137 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 GRPEL1Q9HAV7 217 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 TRPC7Q9HCX4 862 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 TJP2Q9UDY2 1190 aa26.67■■□□□ 1.86
U2AF1-203ENST00000398137 C2orf78A6NCI8 922 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 ZNF840PA6NDX5 716 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 E5RJQ4 531 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 LILRB5O75023 590 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 ZBED1O96006 694 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 RPL34P49207 117 aaKnown RBP26.66■■□□□ 1.86
U2AF1-203ENST00000398137 PGFP49763 221 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 ADKP55263 362 aaKnown RBP26.66■■□□□ 1.86
U2AF1-203ENST00000398137 ZNF268Q14587 947 aaPredicted RBP26.66■■□□□ 1.86
U2AF1-203ENST00000398137 TRIM72Q6ZMU5 477 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 Q6ZS52 159 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 ZNF571Q7Z3V5 609 aaPredicted RBP26.66■■□□□ 1.86
U2AF1-203ENST00000398137 OLIG1Q8TAK6 271 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 DNAJC7Q99615 494 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 MIS12Q9H081 205 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 C2orf42Q9NWW7 574 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 CHORDC1Q9UHD1 332 aaPredicted RBP26.66■■□□□ 1.86
U2AF1-203ENST00000398137 WDR87Q6ZQQ6 2873 aa26.66■■□□□ 1.86
U2AF1-203ENST00000398137 EP300Q09472 2414 aaPredicted RBP26.66■■□□□ 1.86
U2AF1-203ENST00000398137 GPR179Q6PRD1 2367 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 ACADSBP45954 432 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 PON2Q15165 354 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 PTPN20Q4JDL3 420 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 HGSNATQ68CP4 663 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 OR8K1Q8NGG5 319 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 CPA5Q8WXQ8 436 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 PPP1R13BQ96KQ4 1090 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 EBF3Q9H4W6 596 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 SYNCQ9H7C4 482 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 CNGB3Q9NQW8 809 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 ZSCAN32Q9NX65 697 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 PCDHGA2Q9Y5H1 932 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 ZNF292O60281 2723 aa26.65■■□□□ 1.86
U2AF1-203ENST00000398137 A0A1W2PQH9 124 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 AKR1B15C9JRZ8 316 aaPredicted RBP26.64■■□□□ 1.86
U2AF1-203ENST00000398137 CYP1A1P04798 512 aaPredicted RBP26.64■■□□□ 1.86
U2AF1-203ENST00000398137 ARSAP15289 507 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 CDC25BP30305 580 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 HOXC13P31276 330 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 PPP3CCP48454 512 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 ZXDBP98169 803 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 SATB1Q01826 763 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 CCINQ13939 588 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 ZNF77Q15935 545 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 CLEC16AQ2KHT3 1053 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 ITPRIPL2Q3MIP1 535 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 PM20D1Q6GTS8 502 aa26.64■■□□□ 1.86
U2AF1-203ENST00000398137 BHLHA9Q7RTU4 235 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms