RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 APOPT1Q96IL0 206 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 CALN1Q9BXU9 219 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 NIF3L1Q9GZT8 377 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 E5RJQ4 531 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 FCHO1O14526 889 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 STRNO43815 780 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 FKBP6O75344 327 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 AVILO75366 819 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 FAM155BO75949 473 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 KRT7P08729 469 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 ETV4P43268 484 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 RPL26P61254 145 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 PSMC1P62191 440 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 ORC1Q13415 861 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 FAM91A1Q658Y4 838 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 NPNTQ6UXI9 565 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 TTC13Q8NBP0 860 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 KCTD6Q8NC69 237 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 CFAP36Q96G28 342 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 CYTH4Q9UIA0 394 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 PHIPQ8WWQ0 1821 aa16.57■□□□□ 0.24
CHMP1A-201ENST00000397901 AP1G1O43747 822 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 DHRS4L1P0CG22 281 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 RBP3P10745 1247 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 PTPRAP18433 802 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 ARL2P36404 184 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 GJA8P48165 433 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 ERFP50548 548 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 XIAPP98170 497 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 ZNF200P98182 395 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 DPYSL3Q14195 570 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 BTG3Q14201 252 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 HADHQ16836 314 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 CCDC92Q53HC0 331 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 MDH1BQ5I0G3 518 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 BRSK2Q8IWQ3 736 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 ZNF280CQ8ND82 737 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 GAB3Q8WWW8 586 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 SLC7A3Q8WY07 619 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 PRICKLE1Q96MT3 831 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 PANX3Q96QZ0 392 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 NMUR2Q9GZQ4 415 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 DHX33Q9H6R0 707 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 ZNF302Q9NR11 478 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 MCF2LO15068 1137 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 RAP1GAPP47736 663 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 SERPINB8P50452 374 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 GALK1P51570 392 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 CHN2P52757 468 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 EMP3P54852 163 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 TFAMQ00059 246 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 TRPC3Q13507 836 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 HSP90AA5PQ58FG0 334 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 C1orf228Q6PIY5 440 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 RBM44Q6ZP01 1051 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 RAPH1Q70E73 1250 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 CHSY1Q86X52 802 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 SPATA18Q8TC71 538 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 OXNAD1Q96HP4 312 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 MECRQ9BV79 373 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 ZNF518BQ9C0D4 1074 aa16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 NXF1Q9UBU9 619 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-201ENST00000397901 VARSP26640 1264 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 RPL5P46777 297 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 MMRN1Q13201 1228 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 CAPSQ13938 189 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 SH3D19Q5HYK7 790 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 MAP3K21Q5TCX8 1036 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 AAGABQ6PD74 315 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 CDHR3Q6ZTQ4 885 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 PRPF39Q86UA1 669 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 CTAGE3PQ8IX95 158 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 SLC44A1Q8WWI5 657 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 KAT6AQ92794 2004 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 WRNIP1Q96S55 665 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 USP29Q9HBJ7 922 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 AS3MTQ9HBK9 375 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 PPM1HQ9ULR3 514 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 FZD1Q9UP38 647 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 SSX2IPQ9Y2D8 614 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 B2RBV5 119 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 TM7SF2O76062 418 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 USP1O94782 785 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 ZNF699Q32M78 642 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 PRAMEF18Q5VWM3 479 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 DARS2Q6PI48 645 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 KLHDC10Q6PID8 442 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 WDR49Q8IV35 697 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 C12orf42Q96LP6 360 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 OXCT2Q9BYC2 517 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 STRIP2Q9ULQ0 834 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 ADAMTS5Q9UNA0 930 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 POLIQ9UNA4 740 aa16.55■□□□□ 0.24
CHMP1A-201ENST00000397901 CCDC195A0A1B0GUA6 201 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 TRIM49D1C9J1S8 452 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 COPEO14579 308 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 BIRC5O15392 142 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 VCLP18206 1134 aa16.54■□□□□ 0.24
CHMP1A-201ENST00000397901 CDH5P33151 784 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms