RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 PAK5Q9P286 719 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 IKBKGQ9Y6K9 419 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 USH1CQ9Y6N9 552 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 DPYSL4O14531 572 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CHADO15335 359 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 MT-ND3P03897 115 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 YBX3P16989 372 aaKnown RBP eCLIP19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 LMO2P25791 158 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 YWHAZP63104 245 aaKnown RBP19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZNF200P98182 395 aaPredicted RBP19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZBTB6Q15916 424 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 DGKDQ16760 1214 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 DUSP28Q4G0W2 176 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZNF618Q5T7W0 954 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 DPY19L2Q6NUT2 758 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ASRGL1Q7L266 308 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SESTD1Q86VW0 696 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZNF276Q8N554 614 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 LRRC37BQ96QE4 947 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SSU72Q9NP77 194 aaKnown RBP19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ARHGEF3Q9NR81 526 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 INHBAP08476 426 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 LCP1P13796 627 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 OVGP1Q12889 678 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SLC9A4Q6AI14 798 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 GPR142Q7Z601 462 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 VSIG1Q86XK7 387 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 DRAXINQ8NBI3 349 aaPredicted RBP19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PTPRN2Q92932 1015 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 MAML3Q96JK9 1138 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TRIM56Q9BRZ2 755 aaKnown RBP19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 DHX35Q9H5Z1 703 aaKnown RBP19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ETNK1Q9HBU6 452 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 NPHS2Q9NP85 383 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 NR2E3Q9Y5X4 410 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 GPR32O75388 356 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 RECQL4O94761 1208 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 UNC5CO95185 931 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PYGLP06737 847 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TGM2P21980 687 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CYP2F1P24903 491 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 GBE1Q04446 702 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SETDB1Q15047 1291 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CTAGE3PQ8IX95 158 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 C10orf82Q8WW14 230 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TEKT4Q8WW24 435 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SLC44A1Q8WWI5 657 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PLEKHA5Q9HAU0 1116 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ETNK2Q9NVF9 386 aa19.04■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CCL15-CCL14A0A0B4J2E2 113 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 LPXNO60711 386 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TARSP26639 723 aaKnown RBP19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CCDC15Q0P6D6 951 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CCL15Q16663 113 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 C9orf57Q5W0N0 161 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SLC30A9Q6PML9 568 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CAND1Q86VP6 1230 aaKnown RBP19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 BEST2Q8NFU1 509 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 MS4A4AQ96JQ5 239 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TMEM237Q96Q45 408 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 GCOM2Q9BZD3 368 aaPredicted RBP19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 NRDE2Q9H7Z3 1164 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CORO1CQ9ULV4 474 aaPredicted RBP19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 STRNO43815 780 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PYGBP11216 843 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CCNB1P14635 433 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SLC10A2Q12908 348 aaPredicted RBP19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PLEKHG4Q58EX7 1191 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PRAMEF19Q5SWL8 479 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PPM1NQ8N819 430 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZNF570Q96NI8 536 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 FAM124BQ9H5Z6 455 aaPredicted RBP19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 GOLGA2P5Q9HBQ8 144 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 DCTN4Q9UJW0 460 aa19.03■□□□□ 0.64
CHRFAM7A-202ENST00000397827 IQANK1A0A1B0GTG1 560 aa19.02■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CXorf49A8MYA2 514 aaPredicted RBP19.02■□□□□ 0.64
CHRFAM7A-202ENST00000397827 MDM4O15151 490 aa19.02■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SPTLC1O15269 473 aa19.02■□□□□ 0.64
CHRFAM7A-202ENST00000397827 FAM111AQ96PZ2 611 aa19.02■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TBCBQ99426 244 aa19.02■□□□□ 0.64
CHRFAM7A-202ENST00000397827 BCLAF3A2AJT9 711 aaKnown RBP19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 TM9SF1O15321 606 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 DYNC1LI2O43237 492 aaPredicted RBP19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 RTN3O95197 1032 aaPredicted RBP19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 METTL18O95568 372 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 TSHRP16473 764 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 L1CAMP32004 1257 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 BRI3BPQ8WY22 251 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 RTP4Q96DX8 246 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 ZNF670Q9BS34 389 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 TINF2Q9BSI4 451 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 KLC2Q9H0B6 622 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 ZC3H7BQ9UGR2 993 aaKnown RBP19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 HAO1Q9UJM8 370 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 MFHAS1Q9Y4C4 1052 aa19.02■□□□□ 0.63
CHRFAM7A-202ENST00000397827 C1QAP02745 245 aa19.01■□□□□ 0.63
CHRFAM7A-202ENST00000397827 SETSIPP0DME0 302 aa19.01■□□□□ 0.63
CHRFAM7A-202ENST00000397827 NOTUMQ6P988 496 aa19.01■□□□□ 0.63
CHRFAM7A-202ENST00000397827 ZNF467Q7Z7K2 595 aaPredicted RBP19.01■□□□□ 0.63
CHRFAM7A-202ENST00000397827 KLHL23Q8NBE8 558 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms