RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SFMBT1Q9UHJ3 866 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 MAFFQ9ULX9 164 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 SPDYE4A6NLX3 237 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 CCL16O15467 120 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 RFPL2O75678 378 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 TRUB2O95900 331 aaKnown RBP22.1■■□□□ 1.13
CPNE1-204ENST00000397443 TBX18O95935 607 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 PYGMP11217 842 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 RBM10P98175 930 aaKnown RBP22.1■■□□□ 1.13
CPNE1-204ENST00000397443 TAC4Q86UU9 113 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 CCDC50Q8IVM0 306 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 DQX1Q8TE96 717 aaKnown RBP22.1■■□□□ 1.13
CPNE1-204ENST00000397443 CENPIQ92674 756 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-204ENST00000397443 TTLL2Q9BWV7 592 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 PIGVQ9NUD9 493 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 GPATCH2LQ9NWQ4 482 aa22.1■■□□□ 1.13
CPNE1-204ENST00000397443 MDM4O15151 490 aa22.09■■□□□ 1.13
CPNE1-204ENST00000397443 MSI1O43347 362 aaKnown RBP22.09■■□□□ 1.13
CPNE1-204ENST00000397443 KRT1P04264 644 aa22.09■■□□□ 1.13
CPNE1-204ENST00000397443 RARGP13631 454 aa22.09■■□□□ 1.13
CPNE1-204ENST00000397443 PCK1P35558 622 aa22.09■■□□□ 1.13
CPNE1-204ENST00000397443 ODF2Q5BJF6 829 aa22.09■■□□□ 1.13
CPNE1-204ENST00000397443 PPM1LQ5SGD2 360 aa22.09■■□□□ 1.13
CPNE1-204ENST00000397443 ZNF697Q5TEC3 545 aa22.09■■□□□ 1.13
CPNE1-204ENST00000397443 PDE12Q6L8Q7 609 aaKnown RBP22.09■■□□□ 1.13
CPNE1-204ENST00000397443 ARHGAP18Q8N392 663 aa22.09■■□□□ 1.13
CPNE1-204ENST00000397443 NT5C3BQ969T7 300 aa22.09■■□□□ 1.13
CPNE1-204ENST00000397443 RNF25Q96BH1 459 aaPredicted RBP22.09■■□□□ 1.13
CPNE1-204ENST00000397443 TRIM62Q9BVG3 475 aa22.09■■□□□ 1.13
CPNE1-204ENST00000397443 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.09■■□□□ 1.13
CPNE1-204ENST00000397443 ATG2AQ2TAZ0 1938 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 PRLRP16471 622 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 NRIP1P48552 1158 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 SMAD3P84022 425 aaKnown RBP22.08■■□□□ 1.13
CPNE1-204ENST00000397443 CCDC181Q5TID7 509 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 CASP10Q92851 521 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 PSMG2Q969U7 264 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 PRO3102Q9H379 93 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 CCSER2Q9H7U1 834 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 TLE6Q9H808 572 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 TMPRSS4Q9NRS4 437 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 COMMD8Q9NX08 183 aa22.08■■□□□ 1.13
CPNE1-204ENST00000397443 RDXP35241 583 aaKnown RBP22.08■■□□□ 1.12
CPNE1-204ENST00000397443 MLLT1Q03111 559 aaPredicted RBP22.08■■□□□ 1.12
CPNE1-204ENST00000397443 EFEMP1Q12805 493 aa22.08■■□□□ 1.12
CPNE1-204ENST00000397443 C10orf120Q5SQS8 335 aa22.08■■□□□ 1.12
CPNE1-204ENST00000397443 STRADAQ7RTN6 431 aa22.08■■□□□ 1.12
CPNE1-204ENST00000397443 CREG2Q8IUH2 290 aa22.08■■□□□ 1.12
CPNE1-204ENST00000397443 CCDC185Q8N715 623 aa22.08■■□□□ 1.12
CPNE1-204ENST00000397443 PBKQ96KB5 322 aa22.08■■□□□ 1.12
CPNE1-204ENST00000397443 CEP295NLQ96MC4 621 aa22.08■■□□□ 1.12
CPNE1-204ENST00000397443 ZNF334Q9HCZ1 680 aaPredicted RBP22.08■■□□□ 1.12
CPNE1-204ENST00000397443 MTCL1Q9Y4B5 1905 aaKnown RBP22.07■■□□□ 1.12
CPNE1-204ENST00000397443 LRRD1A4D1F6 860 aa22.07■■□□□ 1.12
CPNE1-204ENST00000397443 KRT7P08729 469 aa22.07■■□□□ 1.12
CPNE1-204ENST00000397443 RARAP10276 462 aa22.07■■□□□ 1.12
CPNE1-204ENST00000397443 CYP4V2Q6ZWL3 525 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-204ENST00000397443 ADAT2Q7Z6V5 191 aaKnown RBP22.07■■□□□ 1.12
CPNE1-204ENST00000397443 ITIH5Q86UX2 942 aa22.07■■□□□ 1.12
CPNE1-204ENST00000397443 HS6ST3Q8IZP7 471 aa22.07■■□□□ 1.12
CPNE1-204ENST00000397443 RAPGEF5Q92565 580 aa22.07■■□□□ 1.12
CPNE1-204ENST00000397443 RNF34Q969K3 372 aa22.07■■□□□ 1.12
CPNE1-204ENST00000397443 MAGEB5Q9BZ81 275 aa22.07■■□□□ 1.12
CPNE1-204ENST00000397443 CARD9Q9H257 536 aa22.07■■□□□ 1.12
CPNE1-204ENST00000397443 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.07■■□□□ 1.12
CPNE1-204ENST00000397443 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.07■■□□□ 1.12
CPNE1-204ENST00000397443 HCFC2Q9Y5Z7 792 aa22.07■■□□□ 1.12
CPNE1-204ENST00000397443 DOCK6Q96HP0 2047 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 PDE2AO00408 941 aaPredicted RBP22.06■■□□□ 1.12
CPNE1-204ENST00000397443 RIOK3O14730 519 aaKnown RBP22.06■■□□□ 1.12
CPNE1-204ENST00000397443 RALAP11233 206 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 GTF2F1P35269 517 aaKnown RBP eCLIP22.06■■□□□ 1.126e-10■■■□□ 14.7
CPNE1-204ENST00000397443 ZC3H12AQ5D1E8 599 aaKnown RBP22.06■■□□□ 1.12
CPNE1-204ENST00000397443 SEL1L2Q5TEA6 688 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 LRRC38Q5VT99 294 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 MIB1Q86YT6 1006 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 KATNAL2Q8IYT4 538 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 ELMOD1Q8N336 334 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 CARD6Q9BX69 1037 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 IGFLR1Q9H665 355 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 L2HGDHQ9H9P8 463 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 TRPM5Q9NZQ8 1165 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 COL4A4P53420 1690 aaPredicted RBP22.06■■□□□ 1.12
CPNE1-204ENST00000397443 TLR5O60602 858 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 ZRANB2O95218 330 aaKnown RBP eCLIP22.06■■□□□ 1.121e-6■■□□□ 12.9
CPNE1-204ENST00000397443 PSEN1P49768 467 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 POLNQ7Z5Q5 900 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 KCTD6Q8NC69 237 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 MYRFLQ96LU7 910 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 CORO1BQ9BR76 489 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 SNRNP25Q9BV90 132 aaKnown RBP22.06■■□□□ 1.12
CPNE1-204ENST00000397443 LMAN2LQ9H0V9 348 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 HCFC1R1Q9NWW0 138 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 RRN3Q9NYV6 651 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 CLIC5Q9NZA1 410 aa22.06■■□□□ 1.12
CPNE1-204ENST00000397443 SZT2Q5T011 3432 aa22.05■■□□□ 1.12
CPNE1-204ENST00000397443 ZNF840PA6NDX5 716 aa22.05■■□□□ 1.12
CPNE1-204ENST00000397443 TADA3O75528 432 aa22.05■■□□□ 1.12
CPNE1-204ENST00000397443 FGGP02679 453 aa22.05■■□□□ 1.12
CPNE1-204ENST00000397443 CA9Q16790 459 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms