RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SEL1L2Q5TEA6 688 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 ARHGAP18Q8N392 663 aa28.67■■■□□ 2.18
CPNE1-203ENST00000397442 C3orf70A6NLC5 250 aaPredicted RBP28.66■■■□□ 2.18
CPNE1-203ENST00000397442 PI4K2BG5E9Z4 385 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 IGLV3-25P01717 112 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 KRT1P04264 644 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 RDXP35241 583 aaKnown RBP28.66■■■□□ 2.18
CPNE1-203ENST00000397442 EIF4EBP2Q13542 120 aaPredicted RBP28.66■■■□□ 2.18
CPNE1-203ENST00000397442 RAB30Q15771 203 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 TAC4Q86UU9 113 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 RCOR2Q8IZ40 523 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 MNS1Q8NEH6 495 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 MICAL1Q8TDZ2 1067 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 RNF25Q96BH1 459 aaPredicted RBP28.66■■■□□ 2.18
CPNE1-203ENST00000397442 MYRFLQ96LU7 910 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 HERPUD2Q9BSE4 406 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 CERS4Q9HA82 394 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 WDR6Q9NNW5 1121 aaKnown RBP28.66■■■□□ 2.18
CPNE1-203ENST00000397442 MSRAQ9UJ68 235 aa28.66■■■□□ 2.18
CPNE1-203ENST00000397442 MAGED2Q9UNF1 606 aaPredicted RBP28.66■■■□□ 2.18
CPNE1-203ENST00000397442 MYO7AQ13402 2215 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 CTAGE15A4D2H0 777 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 CTAGE8P0CG41 777 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 CSH1P0DML2 217 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 CSH2P0DML3 217 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 DEUP1Q05D60 604 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 NME3Q13232 169 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 BOLA3Q53S33 107 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 CTAGE6Q86UF2 777 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 FAM131BQ86XD5 332 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 CTAGE4Q8IX94 777 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 TEKT4Q8WW24 435 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 SLITRK1Q96PX8 696 aa28.65■■■□□ 2.18
CPNE1-203ENST00000397442 SNRNP25Q9BV90 132 aaKnown RBP28.65■■■□□ 2.18
CPNE1-203ENST00000397442 CLCN4P51793 760 aa28.64■■■□□ 2.18
CPNE1-203ENST00000397442 MFSD7Q6UXD7 560 aa28.64■■■□□ 2.18
CPNE1-203ENST00000397442 CCDC185Q8N715 623 aa28.64■■■□□ 2.18
CPNE1-203ENST00000397442 SPATA4Q8NEY3 305 aa28.64■■■□□ 2.18
CPNE1-203ENST00000397442 MYRIPQ8NFW9 859 aa28.64■■■□□ 2.18
CPNE1-203ENST00000397442 HSPH1Q92598 858 aa28.64■■■□□ 2.18
CPNE1-203ENST00000397442 SMOC2Q9H3U7 446 aa28.64■■■□□ 2.18
CPNE1-203ENST00000397442 TLR8Q9NR97 1041 aaKnown RBP28.64■■■□□ 2.18
CPNE1-203ENST00000397442 DDIT4Q9NX09 232 aa28.64■■■□□ 2.18
CPNE1-203ENST00000397442 CLIC5Q9NZA1 410 aa28.64■■■□□ 2.18
CPNE1-203ENST00000397442 NUDT5Q9UKK9 219 aa28.64■■■□□ 2.18
CPNE1-203ENST00000397442 ATG2AQ2TAZ0 1938 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 MTCL1Q9Y4B5 1905 aaKnown RBP28.64■■■□□ 2.17
CPNE1-203ENST00000397442 SYNJ2BP-COX16A0A087WUM0 186 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 LRRD1A4D1F6 860 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 TADA3O75528 432 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 PSEN1P49768 467 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 ARSEP51690 589 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 ITIH3Q06033 890 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 LLGL1Q15334 1064 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 SLC13A5Q86YT5 568 aaPredicted RBP28.64■■■□□ 2.17
CPNE1-203ENST00000397442 ZDHHC14Q8IZN3 488 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 KREMEN2Q8NCW0 462 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 TRMT2BQ96GJ1 504 aaKnown RBP28.64■■■□□ 2.17
CPNE1-203ENST00000397442 RBM41Q96IZ5 413 aaKnown RBP28.64■■■□□ 2.17
CPNE1-203ENST00000397442 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.64■■■□□ 2.17
CPNE1-203ENST00000397442 COX16Q9P0S2 106 aa28.64■■■□□ 2.17
CPNE1-203ENST00000397442 TCRBV7S2A1N4TA0A589 114 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 MDM4O15151 490 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 GLUD1P00367 558 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 KDELR1P24390 212 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 LONRF2Q1L5Z9 754 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 ZFYVE27Q5T4F4 411 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 ERMARDQ5T6L9 678 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 PPP2R2DQ66LE6 453 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 MSANTD2Q6P1R3 559 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 CCDC50Q8IVM0 306 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 TDHQ8IZJ6 230 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 CASP10Q92851 521 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 PSMG2Q969U7 264 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 FAM204AQ9H8W3 233 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.63■■■□□ 2.17
CPNE1-203ENST00000397442 GPATCH2LQ9NWQ4 482 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 NR2E1Q9Y466 385 aa28.63■■■□□ 2.17
CPNE1-203ENST00000397442 CD48P09326 243 aa28.62■■■□□ 2.17
CPNE1-203ENST00000397442 CDKN2BP42772 138 aa28.62■■■□□ 2.17
CPNE1-203ENST00000397442 EPHB3P54753 998 aa28.62■■■□□ 2.17
CPNE1-203ENST00000397442 VEPH1Q14D04 833 aa28.62■■■□□ 2.17
CPNE1-203ENST00000397442 TAZQ16635 292 aa28.62■■■□□ 2.17
CPNE1-203ENST00000397442 CA9Q16790 459 aa28.62■■■□□ 2.17
CPNE1-203ENST00000397442 ZC3H12AQ5D1E8 599 aaKnown RBP28.62■■■□□ 2.17
CPNE1-203ENST00000397442 PDE12Q6L8Q7 609 aaKnown RBP28.62■■■□□ 2.17
CPNE1-203ENST00000397442 SPOCD1Q6ZMY3 1216 aa28.62■■■□□ 2.17
CPNE1-203ENST00000397442 DNAJB7Q7Z6W7 309 aaPredicted RBP28.62■■■□□ 2.17
CPNE1-203ENST00000397442 OVCA2Q8WZ82 227 aa28.62■■■□□ 2.17
CPNE1-203ENST00000397442 RPGRIP1Q96KN7 1286 aa28.62■■■□□ 2.17
CPNE1-203ENST00000397442 F9P00740 461 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 RALAP11233 206 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 RARGP13631 454 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 CXCR3P49682 368 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 COPS2P61201 443 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 C2orf54Q08AI8 447 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 SNX30Q5VWJ9 437 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 AP1M1Q9BXS5 423 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 MAGEB5Q9BZ81 275 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 OSBPL8Q9BZF1 889 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms