RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TPM3P06753 285 aa26.55■■□□□ 1.84
TSPAN4-207ENST00000397411 AOC1P19801 751 aa26.55■■□□□ 1.84
TSPAN4-207ENST00000397411 RPL34P49207 117 aaKnown RBP26.55■■□□□ 1.84
TSPAN4-207ENST00000397411 OR6B2Q6IFH4 312 aa26.55■■□□□ 1.84
TSPAN4-207ENST00000397411 BHLHA9Q7RTU4 235 aa26.55■■□□□ 1.84
TSPAN4-207ENST00000397411 FMNL3Q8IVF7 1028 aa26.55■■□□□ 1.84
TSPAN4-207ENST00000397411 EXOC4Q96A65 974 aa26.55■■□□□ 1.84
TSPAN4-207ENST00000397411 TRIM62Q9BVG3 475 aa26.55■■□□□ 1.84
TSPAN4-207ENST00000397411 LTB4R2Q9NPC1 389 aa26.55■■□□□ 1.84
TSPAN4-207ENST00000397411 IFNKQ9P0W0 207 aa26.55■■□□□ 1.84
TSPAN4-207ENST00000397411 CAPN9O14815 690 aa26.54■■□□□ 1.84
TSPAN4-207ENST00000397411 MMEP08473 750 aa26.54■■□□□ 1.84
TSPAN4-207ENST00000397411 VCPP55072 806 aaKnown RBP26.54■■□□□ 1.84
TSPAN4-207ENST00000397411 CWF19L1Q69YN2 538 aaKnown RBP26.54■■□□□ 1.84
TSPAN4-207ENST00000397411 MSANTD4Q8NCY6 345 aa26.54■■□□□ 1.84
TSPAN4-207ENST00000397411 EPS8L1Q8TE68 723 aa26.54■■□□□ 1.84
TSPAN4-207ENST00000397411 OTUB2Q96DC9 234 aa26.54■■□□□ 1.84
TSPAN4-207ENST00000397411 CPXM1Q96SM3 734 aa26.54■■□□□ 1.84
TSPAN4-207ENST00000397411 DDX23Q9BUQ8 820 aaKnown RBP26.54■■□□□ 1.84
TSPAN4-207ENST00000397411 PI15O43692 258 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 NCAM1P13591 858 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 FERP16591 822 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 CTHP32929 405 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 CDR2Q01850 454 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 HTR3DQ70Z44 454 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 ERICH1Q86X53 443 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 ADGRG2Q8IZP9 1017 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 PJA1Q8NG27 643 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 SLC20A1Q8WUM9 679 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 DDX1Q92499 740 aaKnown RBP26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 NUP58Q9BVL2 599 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 DCLK3Q9C098 648 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 SFMBT1Q9UHJ3 866 aa26.53■■□□□ 1.84
TSPAN4-207ENST00000397411 PAPSS1O43252 624 aaPredicted RBP26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 LSM8O95777 96 aaKnown RBP26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 DCNP07585 359 aaKnown RBP26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 ZNF445P59923 1031 aa26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 EFHC1Q5JVL4 640 aa26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 BBS7Q8IWZ6 715 aa26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 TMEM105Q8N8V8 129 aa26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 WBP2Q969T9 261 aa26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 OSBPL6Q9BZF3 934 aa26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 SEPT11Q9NVA2 429 aaKnown RBP26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 ZNF510Q9Y2H8 683 aa26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 MTF2Q9Y483 593 aaPredicted RBP26.52■■□□□ 1.84
TSPAN4-207ENST00000397411 OTOL1A6NHN0 477 aaPredicted RBP26.51■■□□□ 1.83
TSPAN4-207ENST00000397411 CBFA2T2O43439 604 aa26.51■■□□□ 1.83
TSPAN4-207ENST00000397411 STC2O76061 302 aa26.51■■□□□ 1.83
TSPAN4-207ENST00000397411 ADH1CP00326 375 aa26.51■■□□□ 1.83
TSPAN4-207ENST00000397411 PON2Q15165 354 aa26.51■■□□□ 1.83
TSPAN4-207ENST00000397411 DHCR24Q15392 516 aa26.51■■□□□ 1.83
TSPAN4-207ENST00000397411 NOCTQ9UK39 431 aaKnown RBP26.51■■□□□ 1.83
TSPAN4-207ENST00000397411 MYO6Q9UM54 1294 aa26.51■■□□□ 1.83
TSPAN4-207ENST00000397411 HCN4Q9Y3Q4 1203 aa26.51■■□□□ 1.83
TSPAN4-207ENST00000397411 HBS1LQ9Y450 684 aaKnown RBP26.51■■□□□ 1.83
TSPAN4-207ENST00000397411 TRIOO75962 3097 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 MIA3Q5JRA6 1907 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 FAM170AA1A519 330 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 TARSP26639 723 aaKnown RBP26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 GJA4P35212 333 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 YWHAZP63104 245 aaKnown RBP26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 NAA35Q5VZE5 725 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 TRIM72Q6ZMU5 477 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 TOGARAM2Q6ZUX3 1019 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 CPA5Q8WXQ8 436 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 C18orf8Q96DM3 657 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 EDEM3Q9BZQ6 932 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 POPDC2Q9HBU9 364 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 TJP2Q9UDY2 1190 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 NAALADL1Q9UQQ1 740 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 COL4A3Q01955 1670 aa26.5■■□□□ 1.83
TSPAN4-207ENST00000397411 F5P12259 2224 aa26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 COL4A2P08572 1712 aa26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 ERBB2P04626 1255 aa26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 CORO1AP31146 461 aaKnown RBP26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 CDH5P33151 784 aaPredicted RBP26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 HARS2P49590 506 aaKnown RBP26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 GRSF1Q12849 480 aaKnown RBP eCLIP26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 ASIC2Q16515 512 aa26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 PTPN20Q4JDL3 420 aa26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 SFMBT2Q5VUG0 894 aa26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 ZNF397Q8NF99 534 aaPredicted RBP26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 PLD4Q96BZ4 506 aa26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 LMAN1LQ9HAT1 526 aa26.49■■□□□ 1.83
TSPAN4-207ENST00000397411 ZDBF2Q9HCK1 2354 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 CYP17A1P05093 508 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 CHRNB2P17787 502 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 FMO1Q01740 532 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 SLC6A3Q01959 620 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 GAD2Q05329 585 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 ANO4Q32M45 955 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 LY6G5CQ5SRR4 150 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 MSANTD2Q6P1R3 559 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 RHBDF2Q6PJF5 856 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 TXNDC11Q6PKC3 985 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 FAM183BPQ6ZVS7 135 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 ZDHHC17Q8IUH5 632 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 CCDC105Q8IYK2 499 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 AGPAT1Q99943 283 aa26.48■■□□□ 1.83
TSPAN4-207ENST00000397411 XPO4Q9C0E2 1151 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms