RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 MAB21L3Q8N8X9 362 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 SLC35G2Q8TBE7 412 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 ZNF564Q8TBZ8 553 aaPredicted RBP24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 ATXN2LQ8WWM7 1075 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 LACRTQ9GZZ8 138 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 NACA2Q9H009 215 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 SLITRK6Q9H5Y7 841 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 OLA1Q9NTK5 396 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 PYCARDQ9ULZ3 195 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 PPP2R2CQ9Y2T4 447 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 BRWD1Q9NSI6 2320 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 A0A0U1RQJ8 604 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 GRXCR2A6NFK2 248 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 TMEM191CA6NGB0 347 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 C2CD4BA6NLJ0 364 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 TBX18O95935 607 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 PDGFRAP16234 1089 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 GPD1P21695 349 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 KIF5AQ12840 1032 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 TRNP1Q6NT89 227 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 ATRIPQ8WXE1 791 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 SUSD6Q92537 303 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 DDX23Q9BUQ8 820 aaKnown RBP24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 POMKQ9H5K3 350 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 TASP1Q9H6P5 420 aa24.66■■□□□ 1.54
TSPAN4-203ENST00000397397 TRAV19A0A0A6YYK7 116 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 MDM4O15151 490 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 COCHO43405 550 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 ATP5C1P36542 298 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 NOP2P46087 812 aaKnown RBP24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 EFEMP1Q12805 493 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 CBX2Q14781 532 aaPredicted RBP24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 MSANTD2Q6P1R3 559 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 ARL14EPQ8N8R7 260 aaPredicted RBP24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 TRIM44Q96DX7 344 aaPredicted RBP24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 ASB2Q96Q27 587 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 SLC46A2Q9BY10 475 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 TRIM7Q9C029 511 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 OSGEPQ9NPF4 335 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 RASAL2Q9UJF2 1139 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 ANAPC7Q9UJX3 599 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 STAP1Q9ULZ2 295 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 DENND4AQ7Z401 1863 aa24.65■■□□□ 1.54
TSPAN4-203ENST00000397397 XIRP2A4UGR9 3374 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 A0A0A6YYK5 440 aaPredicted RBP24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 SOBPA7XYQ1 873 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 MBTPS2O43462 519 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 PFKLP17858 780 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 HDCP19113 662 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 SDC4P31431 198 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 SULT1E1P49888 294 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 DQX1Q8TE96 717 aaKnown RBP24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 CFAP57Q96MR6 1250 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 SLC22A12Q96S37 553 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 CYP2S1Q96SQ9 504 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 COL25A1Q9BXS0 654 aaPredicted RBP24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 RNF38Q9H0F5 515 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 RRN3Q9NYV6 651 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 SFMBT1Q9UHJ3 866 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 ZMYM5Q9UJ78 669 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 DNMT3LQ9UJW3 386 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 DUSP10Q9Y6W6 482 aa24.64■■□□□ 1.54
TSPAN4-203ENST00000397397 BTNL10A8MVZ5 291 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 MBL2P11226 248 aaPredicted RBP24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 PITX1P78337 314 aaPredicted RBP24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 OGDHQ02218 1023 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 TCEAL1Q15170 157 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 LEXMQ3ZCV2 418 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 CCDC14Q49A88 953 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 KLHDC10Q6PID8 442 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 NPAS3Q8IXF0 933 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 ADAM32Q8TC27 787 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 FGF13Q92913 245 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 BTBD6Q96KE9 485 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 NPY6RQ99463 290 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 TSGA10Q9BZW7 698 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 SMOC2Q9H3U7 446 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 MARCH2Q9P0N8 246 aa24.63■■□□□ 1.53
TSPAN4-203ENST00000397397 DPYSL4O14531 572 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 MTA2O94776 668 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 OLFM2O95897 454 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 CKMP06732 381 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 PSMA2P25787 234 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 KCNQ1P51787 676 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 ZNF143P52747 638 aaPredicted RBP24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 C15orf59Q2T9L4 293 aaPredicted RBP24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 SLC25A52Q3SY17 297 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 TJAP1Q5JTD0 557 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 TAC4Q86UU9 113 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 MIB1Q86YT6 1006 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 ZSWIM3Q96MP5 696 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 TBCBQ99426 244 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 CNPY3Q9BT09 278 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 FAM204AQ9H8W3 233 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 TRIM10Q9UDY6 481 aa24.62■■□□□ 1.53
TSPAN4-203ENST00000397397 SYNJ2BP-COX16A0A087WUM0 186 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 M0QYT0 321 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 MYO1FO00160 1098 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 ZSCAN12O43309 604 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 KRT86O43790 486 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms