RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 MARK1Q9P0L2 795 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 IGLV3-10A0A075B6K4 115 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 ANKRD62A6NC57 917 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 CXCR3P49682 368 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 GSDMDP57764 484 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 CYP4F8P98187 520 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 TAZQ16635 292 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 RAB6CQ53S08 254 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 MMS22LQ6ZRQ5 1243 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 CORO1BQ9BR76 489 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 MED10Q9BTT4 135 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 RAB6CQ9H0N0 254 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 TLR8Q9NR97 1041 aaKnown RBP11.1□□□□□ -0.63
NUP98-205ENST00000397007 HESX1Q9UBX0 185 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 A0A0A0MRY4 1105 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 LTFP02788 710 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 CALB1P05937 261 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 CD19P15391 556 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 KCNA5P22460 613 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 RRM1P23921 792 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 GABRR2P28476 465 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 TAF3Q5VWG9 929 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 PTCRAQ6ISU1 281 aaPredicted RBP11.1□□□□□ -0.63
NUP98-205ENST00000397007 DNAAF5Q86Y56 855 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 TMTC1Q8IUR5 882 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 LRRC57Q8N9N7 239 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 TSC1Q92574 1164 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 VOPP1Q96AW1 172 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 C18orf8Q96DM3 657 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 KIF9Q9HAQ2 790 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 ADAMTS1Q9UHI8 967 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 TLR6Q9Y2C9 796 aa11.1□□□□□ -0.63
NUP98-205ENST00000397007 A0A0U1RQJ8 604 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 IRAK2O43187 625 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 NDUFA10O95299 355 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 MAN1A1P33908 653 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 RGS7P49802 495 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 SLC25A52Q3SY17 297 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 ATRIPQ8WXE1 791 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 CDK5RAP1Q96SZ6 601 aaKnown RBP11.09□□□□□ -0.63
NUP98-205ENST00000397007 THAP2Q9H0W7 228 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.09□□□□□ -0.63
NUP98-205ENST00000397007 STRIP2Q9ULQ0 834 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 HBS1LQ9Y450 684 aaKnown RBP11.09□□□□□ -0.63
NUP98-205ENST00000397007 ZNF106Q9H2Y7 1883 aaKnown RBP11.09□□□□□ -0.63
NUP98-205ENST00000397007 ELF1P32519 619 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 HDAC4P56524 1084 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 CCDC85BQ15834 202 aaPredicted RBP11.09□□□□□ -0.63
NUP98-205ENST00000397007 FAM133BQ5BKY9 247 aaKnown RBP11.09□□□□□ -0.63
NUP98-205ENST00000397007 ATAT1Q5SQI0 421 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 CYP4A22Q5TCH4 519 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 TXNDC8Q6A555 127 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 NADSYN1Q6IA69 706 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 CPXM2Q8N436 756 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 DQX1Q8TE96 717 aaKnown RBP11.09□□□□□ -0.63
NUP98-205ENST00000397007 SMARCD2Q92925 531 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 NAALADL1Q9UQQ1 740 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 MYOFQ9NZM1 2061 aa11.09□□□□□ -0.63
NUP98-205ENST00000397007 SART1O43290 800 aaKnown RBP11.08□□□□□ -0.63
NUP98-205ENST00000397007 STC2O76061 302 aa11.08□□□□□ -0.63
NUP98-205ENST00000397007 FTLP02792 175 aaPredicted RBP11.08□□□□□ -0.63
NUP98-205ENST00000397007 NOS2P35228 1153 aa11.08□□□□□ -0.63
NUP98-205ENST00000397007 ZNF143P52747 638 aaPredicted RBP11.08□□□□□ -0.63
NUP98-205ENST00000397007 GALCP54803 685 aa11.08□□□□□ -0.63
NUP98-205ENST00000397007 RPL7AP62424 266 aaKnown RBP11.08□□□□□ -0.63
NUP98-205ENST00000397007 YWHAZP63104 245 aaKnown RBP11.08□□□□□ -0.63
NUP98-205ENST00000397007 SLC25A11Q02978 314 aaKnown RBP11.08□□□□□ -0.63
NUP98-205ENST00000397007 VEPH1Q14D04 833 aa11.08□□□□□ -0.63
NUP98-205ENST00000397007 EFHC1Q5JVL4 640 aa11.08□□□□□ -0.63
NUP98-205ENST00000397007 PDZD4Q76G19 769 aaPredicted RBP11.08□□□□□ -0.63
NUP98-205ENST00000397007 STRADAQ7RTN6 431 aa11.08□□□□□ -0.63
NUP98-205ENST00000397007 FBXO32Q969P5 355 aa11.08□□□□□ -0.63
NUP98-205ENST00000397007 HPS4Q9NQG7 708 aa11.08□□□□□ -0.63
NUP98-205ENST00000397007 RRN3Q9NYV6 651 aa11.08□□□□□ -0.63
NUP98-205ENST00000397007 RARGP13631 454 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 RFC1P35251 1148 aaPredicted RBP11.08□□□□□ -0.64
NUP98-205ENST00000397007 CDR1P51861 262 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 ALKBH5Q6P6C2 394 aaKnown RBP11.08□□□□□ -0.64
NUP98-205ENST00000397007 PARM1Q6UWI2 310 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 TAC4Q86UU9 113 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 MFSD6LQ8IWD5 586 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 SCN4BQ8IWT1 228 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 E2F7Q96AV8 911 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 PLD4Q96BZ4 506 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 OLA1Q9NTK5 396 aaKnown RBP11.08□□□□□ -0.64
NUP98-205ENST00000397007 PES1O00541 588 aaKnown RBP11.08□□□□□ -0.64
NUP98-205ENST00000397007 ABL1P00519 1130 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 GJA1P17302 382 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 PPP2R5DQ14738 602 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 EML3Q32P44 896 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 ERICH1Q86X53 443 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 NTAN1Q96AB6 310 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 TRIM7Q9C029 511 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 ADGRG1Q9Y653 693 aa11.08□□□□□ -0.64
NUP98-205ENST00000397007 C3orf70A6NLC5 250 aaPredicted RBP11.07□□□□□ -0.64
NUP98-205ENST00000397007 C10orf142B7Z368 130 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 FZD5Q13467 585 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 TANGO2Q6ICL3 276 aa11.07□□□□□ -0.64
NUP98-205ENST00000397007 MYEOVQ96EZ4 313 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms