RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CXCL9Q07325 125 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 DUOXA2Q1HG44 320 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 LPCAT4Q643R3 524 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 TRIM50Q86XT4 487 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 MINDY3Q9H8M7 445 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 PTPRHQ9HD43 1115 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 PIH1D1Q9NWS0 290 aaKnown RBP14.45□□□□□ -0.1
NUP98-204ENST00000397004 SCOCQ9UIL1 159 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 CEP350Q5VT06 3117 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 H0YCG3 227 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 CHADO15335 359 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 MAP3K7O43318 606 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 TOM1L1O75674 476 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 APRTP07741 180 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 YWHAEP62258 255 aaKnown RBP14.45□□□□□ -0.1
NUP98-204ENST00000397004 CDO1Q16878 200 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 NET1Q7Z628 596 aaPredicted RBP14.45□□□□□ -0.1
NUP98-204ENST00000397004 C1orf127Q8N9H9 656 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 SLC7A3Q8WY07 619 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 KHSRPQ92945 711 aaKnown RBP eCLIP14.45□□□□□ -0.19e-7■■□□□ 14.5
NUP98-204ENST00000397004 STMN2Q93045 179 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 TCHPQ9BT92 498 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 TUBB6Q9BUF5 446 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 BCO2Q9BYV7 579 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 TAGLN3Q9UI15 199 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 CSDE1O75534 798 aaKnown RBP14.45□□□□□ -0.1
NUP98-204ENST00000397004 BPGMP07738 259 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 SNRPAP09012 282 aaKnown RBP14.45□□□□□ -0.1
NUP98-204ENST00000397004 VWA5B1Q5TIE3 1220 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 NETO2Q8NC67 525 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 MFHAS1Q9Y4C4 1052 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 HEY1Q9Y5J3 304 aa14.45□□□□□ -0.1
NUP98-204ENST00000397004 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.44□□□□□ -0.1
NUP98-204ENST00000397004 MAGEA13PA6NCF6 341 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 F5H423 210 aaPredicted RBP14.44□□□□□ -0.1
NUP98-204ENST00000397004 NFICP08651 508 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 CRADDP78560 199 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 CCNIQ14094 377 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 NBPF12Q5TAG4 269 aaPredicted RBP14.44□□□□□ -0.1
NUP98-204ENST00000397004 DPY19L2Q6NUT2 758 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 PPP1R2P3Q6NXS1 205 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 NDUFAF2Q8N183 169 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 RNF157Q96PX1 679 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 IL1RAPL1Q9NZN1 696 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 C2CD4BA6NLJ0 364 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 ZNF195O14628 629 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 ALDOAP04075 364 aaKnown RBP14.44□□□□□ -0.1
NUP98-204ENST00000397004 CXCL8P10145 99 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 PROZP22891 400 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 L1CAMP32004 1257 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 GABRB2P47870 512 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 HMGCS2P54868 508 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 TEDDM1Q5T9Z0 273 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 DENND5BQ6ZUT9 1274 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 MFN1Q8IWA4 741 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 ZFAND2BQ8WV99 257 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 RTP4Q96DX8 246 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 OXCT2Q9BYC2 517 aaPredicted RBP14.44□□□□□ -0.1
NUP98-204ENST00000397004 FRMD8P1Q9BZ68 369 aaPredicted RBP14.44□□□□□ -0.1
NUP98-204ENST00000397004 ZNF180Q9UJW8 692 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 PTPRFP10586 1907 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 TRIP11Q15643 1979 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 ETS2P15036 469 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 DPEP1P16444 411 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 UBA1P22314 1058 aaKnown RBP14.44□□□□□ -0.1
NUP98-204ENST00000397004 ATXN1P54253 815 aaKnown RBP14.44□□□□□ -0.1
NUP98-204ENST00000397004 SARNPP82979 210 aaKnown RBP14.44□□□□□ -0.1
NUP98-204ENST00000397004 HADHQ16836 314 aaKnown RBP14.44□□□□□ -0.1
NUP98-204ENST00000397004 MBLAC2Q68D91 279 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 ZPBP2Q6X784 338 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 NUDCD3Q8IVD9 361 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 CXCL16Q9H2A7 254 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 MYOZ2Q9NPC6 264 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 ETNK2Q9NVF9 386 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 PSAT1Q9Y617 370 aa14.44□□□□□ -0.1
NUP98-204ENST00000397004 PHIPQ8WWQ0 1821 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 H7C0C1 242 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 FGF3P11487 239 aaPredicted RBP14.43□□□□□ -0.1
NUP98-204ENST00000397004 ATP5OP48047 213 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 CNPY1Q3B7I2 92 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 CCDC14Q49A88 953 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 SMC1BQ8NDV3 1235 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 TRAPPC12Q8WVT3 735 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 RXFP2Q8WXD0 754 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 SORT1Q99523 831 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 IKBKGQ9Y6K9 419 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 FAM159BA6NKW6 160 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 OGTO15294 1046 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 PDE5AO76074 875 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 FARP2O94887 1054 aaPredicted RBP14.43□□□□□ -0.1
NUP98-204ENST00000397004 APOEP02649 317 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 BACE1P56817 501 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 FAM102AQ5T9C2 384 aaPredicted RBP14.43□□□□□ -0.1
NUP98-204ENST00000397004 C12orf29Q8N999 325 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 RNF217Q8TC41 542 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 MOCOSQ96EN8 888 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 APOL6Q9BWW8 343 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 RSAD1Q9HA92 442 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 NME7Q9Y5B8 376 aa14.43□□□□□ -0.1
NUP98-204ENST00000397004 KLHL33A6NCF5 533 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms