RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 FAM120BQ96EK7 910 aaKnown RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 NCKAP5LQ9HCH0 1330 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 LRRIQ1Q96JM4 1722 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 MGRN1O60291 552 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 CBFA2T3O75081 653 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 GSTM5P46439 218 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 FRMD8Q9BZ67 464 aaPredicted RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 KLHL28Q9NXS3 571 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 WHRNQ9P202 907 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 CCDC154A6NI56 674 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 RPTNQ6XPR3 784 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 NSUN6Q8TEA1 469 aaKnown RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 ZNF668Q96K58 619 aaPredicted RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 MMP19Q99542 508 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 JMJD4Q9H9V9 463 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 GLRA3O75311 464 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 TRIM3O75382 744 aaPredicted RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 KCNJ6P48051 423 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 GMFBP60983 142 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 STK4Q13043 487 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 Q4G0T1 1027 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 SLC22A9Q8IVM8 553 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 LRRC17Q8N6Y2 441 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 FAM172AQ8WUF8 416 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 HAVCR1Q96D42 359 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 CCDC115Q96NT0 180 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 LIN7AO14910 233 aaPredicted RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 GH2P01242 217 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 PBLDP30039 288 aaPredicted RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 ATN1P54259 1190 aaPredicted RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 TRAPPC11Q7Z392 1133 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 GSDMCQ9BYG8 508 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 PIN4Q9Y237 131 aaKnown RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 CHURC1-FNTBB4DL54 471 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 ALDH9A1P49189 494 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 EFR3AQ14156 821 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 SNRNP35Q16560 246 aaKnown RBP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 UTS2BQ765I0 119 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 NT5DC4Q86YG4 428 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 USP38Q8NB14 1042 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 CYP4F12Q9HCS2 524 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 EURLQ9NYK6 297 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A4-201ENST00000396625 DYRK1BQ9Y463 629 aa10.61□□□□□ -0.71
COL4A4-201ENST00000396625 SPHKAPQ2M3C7 1700 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 A0A087WXM4 84 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 SDR42E2A6NKP2 422 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 PRODHO43272 600 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ANXA9O76027 345 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ASNSP08243 561 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 PTPN4P29074 926 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 GSTT1P30711 240 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 EXOC3L1Q86VI1 746 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ZSCAN18Q8TBC5 510 aaPredicted RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ABCB10Q9NRK6 738 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 GPRC5DQ9NZD1 345 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 CLOCKO15516 846 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 KPNA1P52294 538 aaPredicted RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ARF3P61204 181 aaPredicted RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ARF1P84077 181 aaKnown RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 OCLNQ16625 522 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ERO1BQ86YB8 467 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 TMEM132CQ8N3T6 1108 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 PUS3Q9BZE2 481 aaKnown RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 GALCP54803 685 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 CYP24A1Q07973 514 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ZNF846Q147U1 533 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 RUNDC3AQ59EK9 446 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 DHFR2Q86XF0 187 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 PSMA8Q8TAA3 256 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 FAM136AQ96C01 138 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 CITED4Q96RK1 184 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 CCDC28BQ9BUN5 200 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 CLPBQ9H078 707 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 SRP68Q9UHB9 627 aaKnown RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 GSTK1Q9Y2Q3 226 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 TMEM114B3SHH9 223 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 LARGE1O95461 756 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 CDH3P22223 829 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 PLCL1Q15111 1095 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 MRNIPQ6NTE8 343 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 RNF19BQ6ZMZ0 732 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 HPS6Q86YV9 775 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 RHOBTB2Q9BYZ6 727 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 NUDT5Q9UKK9 219 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 IL18RAPO95256 599 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 STILQ15468 1287 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ERICH5Q6P6B1 374 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 REXO1L1PQ8IX06 675 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 PROX1Q92786 737 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 CHST12Q9NRB3 414 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 RAD54BQ9Y620 910 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ERN1O75460 977 aaKnown RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 TCF4P15884 667 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 XRCC4Q13426 336 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 GOLGA7BQ2TAP0 167 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 RNF44Q7L0R7 432 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ARHGEF19Q8IW93 802 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ULK2Q8IYT8 1036 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms