RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 ABHD14A-ACY1A0A1B0GW23 586 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 OR2W5A6NFC9 320 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 TISP43B9A030 160 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 PCDH17O14917 1159 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 HNRNPDLO14979 420 aaKnown RBP4.86□□□□□ -1.63
CMC1-202ENST00000396610 VIPP01282 170 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 TECP42680 631 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 TXNL4AP83876 142 aaKnown RBP4.86□□□□□ -1.63
CMC1-202ENST00000396610 AASDHQ4L235 1098 aaPredicted RBP4.86□□□□□ -1.63
CMC1-202ENST00000396610 TMEM196Q5HYL7 178 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 PRAMEF17Q5VTA0 474 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 DENND2CQ68D51 928 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 SERPINA13PQ6UXR4 307 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 ZNF782Q6ZMW2 699 aaPredicted RBP4.86□□□□□ -1.63
CMC1-202ENST00000396610 LINC01465Q8N7H1 131 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.86□□□□□ -1.63
CMC1-202ENST00000396610 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 PNLDC1Q8NA58 520 aaKnown RBP4.86□□□□□ -1.63
CMC1-202ENST00000396610 VPS37AQ8NEZ2 397 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 EDC3Q96F86 508 aaKnown RBP4.86□□□□□ -1.63
CMC1-202ENST00000396610 TMEM41AQ96HV5 264 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 VPS50Q96JG6 964 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 RITA1Q96K30 269 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 CRB3Q9BUF7 120 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 SAP30LQ9HAJ7 183 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 NECTIN3Q9NQS3 549 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 TM7SF3Q9NS93 570 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 IGSF9Q9P2J2 1179 aa4.86□□□□□ -1.63
CMC1-202ENST00000396610 A0A087WV62 115 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 TCRBV5S1A1TA0A578 114 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 AQP12BA6NM10 295 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 PIP5K1BO14986 540 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 ADAMTS3O15072 1205 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 ZSCAN9O15535 394 aaPredicted RBP4.85□□□□□ -1.63
CMC1-202ENST00000396610 PRAMEF2O60811 474 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 GRM1Q13255 1194 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 AWAT1Q58HT5 328 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 ZNF66Q6ZN08 573 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 CHSY1Q86X52 802 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 DPF1Q92782 380 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 PRR11Q96HE9 360 aaPredicted RBP4.85□□□□□ -1.63
CMC1-202ENST00000396610 WDR12Q9GZL7 423 aaKnown RBP4.85□□□□□ -1.63
CMC1-202ENST00000396610 PLCB1Q9NQ66 1216 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 FSCN3Q9NQT6 498 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 VPS45Q9NRW7 570 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 TFCP2L1Q9NZI6 479 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 MAGED2Q9UNF1 606 aaPredicted RBP4.85□□□□□ -1.63
CMC1-202ENST00000396610 LRCH1Q9Y2L9 728 aa4.85□□□□□ -1.63
CMC1-202ENST00000396610 J3KTA2 159 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 DHHO43323 396 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 GCATO75600 419 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 SRGAP2BP0DMP2 458 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 GPC5P78333 572 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 RAE1P78406 368 aaKnown RBP4.84□□□□□ -1.63
CMC1-202ENST00000396610 TNFAIP2Q03169 654 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 SLC10A2Q12908 348 aaPredicted RBP4.84□□□□□ -1.63
CMC1-202ENST00000396610 LARS2Q15031 903 aaKnown RBP4.84□□□□□ -1.63
CMC1-202ENST00000396610 FAM187BQ17R55 369 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 ARL6IP4Q66PJ3 421 aaKnown RBP4.84□□□□□ -1.63
CMC1-202ENST00000396610 GGT6Q6P531 493 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 C1orf228Q6PIY5 440 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 DCDC5Q6ZRR9 648 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 PTF1AQ7RTS3 328 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 NGDNQ8NEJ9 315 aaKnown RBP4.84□□□□□ -1.63
CMC1-202ENST00000396610 HS6ST2Q96MM7 605 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 USP29Q9HBJ7 922 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 DTNAQ9Y4J8 743 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 PCDHB2Q9Y5E7 798 aa4.84□□□□□ -1.63
CMC1-202ENST00000396610 COL11A2P13942 1736 aaPredicted RBP4.83□□□□□ -1.64
CMC1-202ENST00000396610 MASP2O00187 686 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 ASNA1O43681 348 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 USP1O94782 785 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 MT-CO3P00414 261 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 MBPP02686 304 aaPredicted RBP4.83□□□□□ -1.64
CMC1-202ENST00000396610 PRKCGP05129 697 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 FBLP22087 321 aaKnown RBP4.83□□□□□ -1.64
CMC1-202ENST00000396610 CD38P28907 300 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 GALNSP34059 522 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 DGKQP52824 942 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 CCDC15Q0P6D6 951 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 BFSP2Q13515 415 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 KCNB1Q14721 858 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 P3H1Q32P28 736 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 FAM90A2PQ658T7 463 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 DPY19L2P1Q6NXN4 242 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 TMEM65Q6PI78 240 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 SYCE2Q6PIF2 218 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 PIK3AP1Q6ZUJ8 805 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 RASGRP3Q8IV61 690 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 CLASRPQ8N2M8 674 aaKnown RBP4.83□□□□□ -1.64
CMC1-202ENST00000396610 SEMA6DQ8NFY4 1073 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 STYXQ8WUJ0 223 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 POF1BQ8WVV4 589 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 DDB2Q92466 427 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 KAZALD1Q96I82 304 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 ASB2Q96Q27 587 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 EPS8L2Q9H6S3 715 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 CA14Q9ULX7 337 aa4.83□□□□□ -1.64
CMC1-202ENST00000396610 LGALS16A8MUM7 142 aa4.82□□□□□ -1.64
CMC1-202ENST00000396610 F5H423 210 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms