RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 MMADHCQ9H3L0 296 aaPredicted RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 UGGT1Q9NYU2 1555 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 ODC1P11926 461 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 ZNF177Q13360 481 aaPredicted RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 FAXCQ5TGI0 409 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 REXO1L1PQ8IX06 675 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 TPD52L3Q96J77 140 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 PRMT7Q9NVM4 692 aaPredicted RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 DDX20Q9UHI6 824 aaKnown RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 M0QYT0 321 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 AKAP5P24588 427 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 RNASE11Q8TAA1 199 aaKnown RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 BTBD10Q9BSF8 475 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 CDC42EP4Q9H3Q1 356 aaKnown RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 STN1Q9H668 368 aaKnown RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 TUBE1Q9UJT0 475 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 CCDC154A6NI56 674 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 CRTAMO95727 393 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 TPBGLP0DKB5 382 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 PRLRP16471 622 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 TGM3Q08188 693 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 DCTN2Q13561 401 aaKnown RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 FIG4Q92562 907 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 TCF7L2Q9NQB0 619 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 MAP3K4Q9Y6R4 1608 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 JAK1P23458 1154 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 DSG3P32926 999 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 SLC11A2P49281 568 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 FXR2P51116 673 aaKnown RBP eCLIP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 TMPRSS6Q8IU80 811 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 SEPHS2Q99611 448 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 VTI1BQ9UEU0 232 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 GTF3C4Q9UKN8 822 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 UBDO15205 165 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 ABCB1P08183 1280 aaPredicted RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 CNPP09543 421 aaKnown RBP14.37□□□□□ -0.11
COL4A3-202ENST00000396578 TSHZ1Q6ZSZ6 1077 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 C9orf16Q9BUW7 83 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 UGT2B28Q9BY64 529 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 FUT8Q9BYC5 575 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 PDGFCQ9NRA1 345 aa14.37□□□□□ -0.11
COL4A3-202ENST00000396578 MYL12BO14950 172 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 INPP4BO15327 924 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 OTUD3Q5T2D3 398 aaPredicted RBP14.36□□□□□ -0.11
COL4A3-202ENST00000396578 LNPEPQ9UIQ6 1025 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 SAMD9LQ8IVG5 1584 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 ZNF543Q08ER8 600 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 MAD2L1Q13257 205 aaPredicted RBP14.36□□□□□ -0.11
COL4A3-202ENST00000396578 DDIT4Q9NX09 232 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 KLHL28Q9NXS3 571 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 USP18Q9UMW8 372 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 ASS1P00966 412 aaKnown RBP14.36□□□□□ -0.11
COL4A3-202ENST00000396578 TMEM62Q0P6H9 643 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 COMMD2Q86X83 199 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 ADGRE3Q9BY15 652 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 RABGEF1Q9UJ41 708 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 MROH7Q68CQ1 1323 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 ITGB3P05106 788 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 IGKV5-2P06315 115 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 BGNP21810 368 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 GTF2E2P29084 291 aaKnown RBP14.36□□□□□ -0.11
COL4A3-202ENST00000396578 NR6A1Q15406 480 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 SLFN11Q7Z7L1 901 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 DCUN1D5Q9BTE7 237 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 TBX20Q9UMR3 447 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 TFR2Q9UP52 801 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 PCDHB7Q9Y5E2 793 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 CPA3P15088 417 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 PON1P27169 355 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 PCNX4Q63HM2 1172 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 EFCAB12Q6NXP0 572 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 NSMCE2Q96MF7 247 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 ELOVL6Q9H5J4 265 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 TRPC4Q9UBN4 977 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 BMP10O95393 424 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 GHRP10912 638 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 GLB1LQ6UWU2 654 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 RIPOR1Q6ZS17 1223 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 MTMR4Q9NYA4 1195 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 BICRAQ9NZM4 1560 aa14.36□□□□□ -0.11
COL4A3-202ENST00000396578 ITSN1Q15811 1721 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 PIK3CDO00329 1044 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 GRIK3Q13003 919 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 SLC26A11Q86WA9 606 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 CLVS1Q8IUQ0 354 aaPredicted RBP14.35□□□□□ -0.11
COL4A3-202ENST00000396578 TCHHQ07283 1943 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 RPS6KA5O75582 802 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 ECDO95905 644 aaPredicted RBP14.35□□□□□ -0.11
COL4A3-202ENST00000396578 KRT6AP02538 564 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 ARHGAP15Q53QZ3 475 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 DHFR2Q86XF0 187 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 IGDCC4Q8TDY8 1250 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 TEX13BQ9BXU2 312 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 VANGL2Q9ULK5 521 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 PLEKP08567 350 aaPredicted RBP14.35□□□□□ -0.11
COL4A3-202ENST00000396578 ATG4AQ8WYN0 398 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 EMILIN2Q9BXX0 1053 aa14.35□□□□□ -0.11
COL4A3-202ENST00000396578 IFNGR2P38484 337 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms