RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 FKBP1BP68106 108 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 BEX3Q00994 111 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 BNIP1Q12981 228 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 KBTBD12Q3ZCT8 623 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 PRPF39Q86UA1 669 aaKnown RBP17.2■□□□□ 0.34
TRIM39-205ENST00000396551 CAND1Q86VP6 1230 aaKnown RBP17.2■□□□□ 0.34
TRIM39-205ENST00000396551 BANPQ8N9N5 519 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 SMG8Q8ND04 991 aaKnown RBP17.2■□□□□ 0.34
TRIM39-205ENST00000396551 ZNF560Q96MR9 790 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 SNX25Q9H3E2 840 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 AP4E1Q9UPM8 1137 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 SCNN1AP37088 669 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 TAF6P49848 677 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 YWHAGP61981 247 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRIM39-205ENST00000396551 HHATQ5VTY9 493 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 CCDC33Q8N5R6 958 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 CCDC63Q8NA47 563 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 NDRG1Q92597 394 aaKnown RBP17.2■□□□□ 0.34
TRIM39-205ENST00000396551 NCAPGQ9BPX3 1015 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 ETNK1Q9HBU6 452 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 RXFP1Q9HBX9 757 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 MFHAS1Q9Y4C4 1052 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 IPPQ9Y573 584 aa17.2■□□□□ 0.34
TRIM39-205ENST00000396551 EDF1O60869 148 aaKnown RBP17.19■□□□□ 0.34
TRIM39-205ENST00000396551 ATP2A2P16615 1042 aaKnown RBP17.19■□□□□ 0.34
TRIM39-205ENST00000396551 IGFBP6P24592 240 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-205ENST00000396551 ADRA1DP25100 572 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 MAGEA6P43360 314 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 ARCQ7LC44 396 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 ZNF276Q8N554 614 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 APPL2Q8NEU8 664 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 SLC44A1Q8WWI5 657 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 PLCD4Q9BRC7 762 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 ECT2Q9H8V3 914 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 KLHL14Q9P2G3 628 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 TTLL3Q9Y4R7 772 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 ZWINTO95229 277 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 MYL3P08590 195 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 ELF3P78545 371 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-205ENST00000396551 TCP10LQ8TDR4 215 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 CFAP36Q96G28 342 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 POPDC2Q9HBU9 364 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 SLC17A7Q9P2U7 560 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 DESP17661 470 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 PTK7Q13308 1070 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 ADGRF2Q8IZF7 708 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 PYROXD2Q8N2H3 581 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 LRRC8CQ8TDW0 803 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 SERAC1Q96JX3 654 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 CSPG4P5Q96PW8 444 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 PNPLA8Q9NP80 782 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 CYLDQ9NQC7 956 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 GTF2IRD1Q9UHL9 959 aa17.19■□□□□ 0.34
TRIM39-205ENST00000396551 HGSO14964 777 aaPredicted RBP17.18■□□□□ 0.34
TRIM39-205ENST00000396551 CELF2O95319 508 aaKnown RBP17.18■□□□□ 0.34
TRIM39-205ENST00000396551 METTL18O95568 372 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 FAAP100Q0VG06 881 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 PARP9Q8IXQ6 854 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 ZNF75CPQ92670 426 aaPredicted RBP17.18■□□□□ 0.34
TRIM39-205ENST00000396551 HSFY1Q96LI6 401 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 USP3Q9Y6I4 520 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 APRTP07741 180 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 PNPLA4P41247 253 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 LILRA4P59901 499 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 SV2CQ496J9 727 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 SLC45A4Q5BKX6 768 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 SH2D5Q6ZV89 423 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 ZNF534Q76KX8 674 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 FAM228AQ86W67 206 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 CDKL3Q8IVW4 592 aaPredicted RBP17.18■□□□□ 0.34
TRIM39-205ENST00000396551 KLC2Q9H0B6 622 aa17.18■□□□□ 0.34
TRIM39-205ENST00000396551 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRIM39-205ENST00000396551 MGRN1O60291 552 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 ACADSBP45954 432 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 OTUD1Q5VV17 481 aaPredicted RBP17.17■□□□□ 0.34
TRIM39-205ENST00000396551 NCBP2-AS2Q69YL0 99 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 TBC1D1Q86TI0 1168 aaPredicted RBP17.17■□□□□ 0.34
TRIM39-205ENST00000396551 C2orf69Q8N8R5 385 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 GBP7Q8N8V2 638 aaPredicted RBP17.17■□□□□ 0.34
TRIM39-205ENST00000396551 NR2E3Q9Y5X4 410 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 CLDN5O00501 218 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 PTGESO14684 152 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 FAM155BO75949 473 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 BEST1O76090 585 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 AMPD1P23109 780 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 CRYBB1P53674 252 aaPredicted RBP17.17■□□□□ 0.34
TRIM39-205ENST00000396551 PITX1P78337 314 aaPredicted RBP17.17■□□□□ 0.34
TRIM39-205ENST00000396551 KCNT2Q6UVM3 1135 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 PIGZQ86VD9 579 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 DEFB106AQ8N104 65 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 B3GALNT2Q8NCR0 500 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 XPO1O14980 1071 aaKnown RBP17.17■□□□□ 0.34
TRIM39-205ENST00000396551 XPOTO43592 962 aaKnown RBP17.17■□□□□ 0.34
TRIM39-205ENST00000396551 HUS1O60921 280 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 SPAG6O75602 509 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 GOT1P17174 413 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 WARSP23381 471 aaKnown RBP17.17■□□□□ 0.34
TRIM39-205ENST00000396551 KCNJ2P63252 427 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 IRF5Q13568 498 aa17.17■□□□□ 0.34
TRIM39-205ENST00000396551 PAQR9Q6ZVX9 377 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms