RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PLEKHG6Q3KR16 790 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 EGFLAMQ63HQ2 1017 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 ACOT1Q86TX2 421 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 SLC41A1Q8IVJ1 513 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 NELFCDQ8IXH7 590 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 CADM4Q8NFZ8 388 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 MRGPRX1Q96LB2 322 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 CDK5RAP1Q96SZ6 601 aaKnown RBP18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 DNMT3LQ9UJW3 386 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 HCN2Q9UL51 889 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 CYP8B1Q9UNU6 501 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 PCDHA5Q9Y5H7 936 aa18.48■□□□□ 0.55
EXOSC3-202ENST00000396521 STX6O43752 255 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 GREM1O60565 184 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 GJB3O75712 270 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 YEATS4O95619 227 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 C4BPAP04003 597 aaKnown RBP18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 FAM200BP0CF97 657 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 IRF1P10914 325 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 OXTRP30559 389 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 DGKGP49619 791 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 RING1Q06587 406 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 PROSER1Q86XN7 944 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 MIB1Q86YT6 1006 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 SLC9A9Q8IVB4 645 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 CHCHD4Q8N4Q1 142 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 SLC2A14Q8TDB8 520 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 ADAMTS14Q8WXS8 1223 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 DNASE2BQ8WZ79 361 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 SMOQ99835 787 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 APOBEC2Q9Y235 224 aaKnown RBP18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 SLC27A6Q9Y2P4 619 aa18.47■□□□□ 0.55
EXOSC3-202ENST00000396521 MYO18AQ92614 2054 aaKnown RBP18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 PRRT4C9JH25 899 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 IKBKBO14920 756 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 CD6P30203 668 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 CHKAP35790 457 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 WASP42768 502 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 MAP3K7CLP57077 242 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 IL27RAQ6UWB1 636 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 DEFB119Q8N690 84 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 ZMIZ2Q8NF64 920 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 UCMAQ8WVF2 138 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 FBXO10Q9UK96 956 aa18.46■□□□□ 0.55
EXOSC3-202ENST00000396521 A0A1B0GTW7 788 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 TRIM24O15164 1050 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 CISD3P0C7P0 127 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 ZNF883P0CG24 379 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 NDST1P52848 882 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 COG7P83436 770 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 TPGS1Q6ZTW0 290 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 GLRX5Q86SX6 157 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 TMC2Q8TDI7 906 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 ACOX2Q99424 681 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 HNRNPABQ99729 332 aaKnown RBP18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 DCLK3Q9C098 648 aa18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 KIAA1522Q9P206 1035 aaPredicted RBP18.45■□□□□ 0.54
EXOSC3-202ENST00000396521 LRRIQ3A6PVS8 624 aaPredicted RBP18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 POLR2DO15514 142 aaKnown RBP18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 SH3BP5O60239 455 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 TBX18O95935 607 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 CAPNS1P04632 268 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 CCDC130P13994 396 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 ZACNQ401N2 412 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 Q6ZNB5 142 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 NAXDQ8IW45 347 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 WBP2Q969T9 261 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 IMPG2Q9BZV3 1241 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 PCED1AQ9H1Q7 454 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 PRDM16Q9HAZ2 1276 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 SLC39A2Q9NP94 309 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 FSCN3Q9NQT6 498 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 ITM2CQ9NQX7 267 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 DMAC2Q9NW81 257 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 CACNA2D2Q9NY47 1150 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 FAM13BQ9NYF5 915 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 CLIC5Q9NZA1 410 aa18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 TNRC6BQ9UPQ9 1833 aaKnown RBP18.44■□□□□ 0.54
EXOSC3-202ENST00000396521 MYOFQ9NZM1 2061 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 TIMM44O43615 452 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 BEST1O76090 585 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 VNN1O95497 513 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 ASS1P00966 412 aaKnown RBP18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 RALAP11233 206 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 RARGP13631 454 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 CASP4P49662 377 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 FAM193AP78312 1265 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 ENPP2Q13822 863 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 EIF4HQ15056 248 aaKnown RBP18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 C10orf120Q5SQS8 335 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 SHC4Q6S5L8 630 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 KIAA1324Q6UXG2 1013 aaKnown RBP18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 SCARA5Q6ZMJ2 495 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 TOGARAM2Q6ZUX3 1019 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 NT5C1AQ9BXI3 368 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 SDCBP2Q9H190 292 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 CYP3A43Q9HB55 503 aa18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 WSB2Q9NYS7 404 aaPredicted RBP18.43■□□□□ 0.54
EXOSC3-202ENST00000396521 USP36Q9P275 1121 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms