RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 UPP1Q16831 310 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 FNBP1LQ5T0N5 605 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 MICALCLQ6ZW33 695 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 PSTKQ8IV42 348 aaKnown RBP15.54■□□□□ 0.08
CBX3-202ENST00000396386 PDIK1LQ8N165 341 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 PYROXD1Q8WU10 500 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 PGBD4Q96DM1 585 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 CHMP6Q96FZ7 201 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 CSPG4P5Q96PW8 444 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 SLC2A13Q96QE2 648 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 OSBPL7Q9BZF2 842 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 CCDC134Q9H6E4 229 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 USP29Q9HBJ7 922 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 UBN1Q9NPG3 1134 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 MTMR10Q9NXD2 777 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 RCOR3Q9P2K3 495 aaPredicted RBP15.54■□□□□ 0.08
CBX3-202ENST00000396386 TBK1Q9UHD2 729 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 NAALADL1Q9UQQ1 740 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 ACTL7BQ9Y614 415 aa15.54■□□□□ 0.08
CBX3-202ENST00000396386 TCRBV7S3A2A0A539 114 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 TMEM120BA0PK00 339 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 C5orf60A6NFR6 353 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 CHADO15335 359 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 BANF1O75531 89 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 SKIP12755 728 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 TSHRP16473 764 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 RBL1P28749 1068 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 ARL4AP40617 200 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 TKTL1P51854 596 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 NRLP54845 237 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 SP3Q02447 781 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 XRCC4Q13426 336 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 KCNJ11Q14654 390 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 DCAF6Q58WW2 860 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 OTUD1Q5VV17 481 aaPredicted RBP15.53■□□□□ 0.08
CBX3-202ENST00000396386 VSTM1Q6UX27 236 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 CAPN12Q6ZSI9 719 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 TADA2BQ86TJ2 420 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 FAM131BQ86XD5 332 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 NDRG1Q92597 394 aaKnown RBP15.53■□□□□ 0.08
CBX3-202ENST00000396386 NPY6RQ99463 290 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 FZD10Q9ULW2 581 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 TIMM13Q9Y5L4 95 aaPredicted RBP15.53■□□□□ 0.08
CBX3-202ENST00000396386 CLUHO75153 1309 aa15.53■□□□□ 0.08
CBX3-202ENST00000396386 A0A0U1RQF3 1178 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 CABYRO75952 493 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 BRAFP15056 766 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 NR2C2P49116 596 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 CAP1Q01518 475 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 ITGA7Q13683 1181 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 MSS51Q4VC12 460 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 SLC45A4Q5BKX6 768 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 FAM26DQ5JW98 314 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 CYP4X1Q8N118 509 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 SMARCD1Q96GM5 515 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 PCED1BQ96HM7 432 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 QKIQ96PU8 341 aaKnown RBP eCLIP15.52■□□□□ 0.08
CBX3-202ENST00000396386 ADAM2Q99965 735 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 ULBP1Q9BZM6 244 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 KLC2Q9H0B6 622 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 PRDM16Q9HAZ2 1276 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 POPDC2Q9HBU9 364 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 RNF186Q9NXI6 227 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 SLC24A2Q9UI40 661 aa15.52■□□□□ 0.08
CBX3-202ENST00000396386 ZNF638Q14966 1978 aaKnown RBP15.52■□□□□ 0.08
CBX3-202ENST00000396386 MYBPHLA2RUH7 354 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 POC1B-GALNT4F8VUJ3 575 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 IBSPP21815 317 aaPredicted RBP15.52■□□□□ 0.07
CBX3-202ENST00000396386 DRD4P21917 467 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 GCAP28676 217 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 DAOAP59103 153 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 GPX6P59796 221 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 TRIM71Q2Q1W2 868 aaKnown RBP15.52■□□□□ 0.07
CBX3-202ENST00000396386 BBS9Q3SYG4 887 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 TIGD5Q53EQ6 642 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 C4orf22Q6V702 233 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 BNIPLQ7Z465 357 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 RNF180Q86T96 592 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 METTL23Q86XA0 190 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 SRRM1Q8IYB3 904 aaKnown RBP15.52■□□□□ 0.07
CBX3-202ENST00000396386 FBXO36Q8NEA4 188 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 NT5C3BQ969T7 300 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 UROC1Q96N76 676 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 SMOQ99835 787 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 PRMT1Q99873 361 aaKnown RBP15.52■□□□□ 0.07
CBX3-202ENST00000396386 PAAF1Q9BRP4 392 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 FRMD8Q9BZ67 464 aaPredicted RBP15.52■□□□□ 0.07
CBX3-202ENST00000396386 RAB6BQ9NRW1 208 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 TRMT13Q9NUP7 481 aaKnown RBP15.52■□□□□ 0.07
CBX3-202ENST00000396386 FETUBQ9UGM5 382 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 DDX20Q9UHI6 824 aaKnown RBP15.52■□□□□ 0.07
CBX3-202ENST00000396386 GGA2Q9UJY4 613 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 ZMYND8Q9ULU4 1186 aaPredicted RBP15.52■□□□□ 0.07
CBX3-202ENST00000396386 USP3Q9Y6I4 520 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 PTPRDP23468 1912 aa15.52■□□□□ 0.07
CBX3-202ENST00000396386 NLRC5Q86WI3 1866 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 H3BRJ5 948 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 MAP3K6O95382 1288 aa15.51■□□□□ 0.07
CBX3-202ENST00000396386 ATP2A2P16615 1042 aaKnown RBP15.51■□□□□ 0.07
CBX3-202ENST00000396386 GOT1P17174 413 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms