RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ELMO3Q96BJ8 720 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 ZFRQ96KR1 1074 aaKnown RBP17.23■□□□□ 0.35
DDR1-229ENST00000396342 KLF16Q9BXK1 252 aaPredicted RBP17.23■□□□□ 0.35
DDR1-229ENST00000396342 CLIC5Q9NZA1 410 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 HMGXB4Q9UGU5 601 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 EVLQ9UI08 416 aaPredicted RBP17.23■□□□□ 0.35
DDR1-229ENST00000396342 LNP1A1A4G5 178 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 CACNG3O60359 315 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 BEST1O76090 585 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 TBX18O95935 607 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 CETN1Q12798 172 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 BECN1Q14457 450 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 GAB4Q2WGN9 574 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 ZNF394Q53GI3 561 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 CCDC186Q7Z3E2 898 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 ETFBKMTQ8IXQ9 262 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 ZMIZ2Q8NF64 920 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 RNF139Q8WU17 664 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 TMEM176AQ96HP8 235 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 IPO9Q96P70 1041 aaKnown RBP17.22■□□□□ 0.35
DDR1-229ENST00000396342 RXFP3Q9NSD7 469 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.22■□□□□ 0.35
DDR1-229ENST00000396342 RAB20Q9NX57 234 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 RASAL2Q9UJF2 1139 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 STARD13Q9Y3M8 1113 aa17.22■□□□□ 0.35
DDR1-229ENST00000396342 GFRA2O00451 464 aa17.21■□□□□ 0.35
DDR1-229ENST00000396342 SYNCRIPO60506 623 aaKnown RBP17.21■□□□□ 0.35
DDR1-229ENST00000396342 GNSP15586 552 aa17.21■□□□□ 0.35
DDR1-229ENST00000396342 BCKDHBP21953 392 aa17.21■□□□□ 0.35
DDR1-229ENST00000396342 WASP42768 502 aa17.21■□□□□ 0.35
DDR1-229ENST00000396342 KIF11P52732 1056 aa17.21■□□□□ 0.35
DDR1-229ENST00000396342 DUOXA1Q1HG43 343 aa17.21■□□□□ 0.35
DDR1-229ENST00000396342 DCAF17Q5H9S7 520 aaPredicted RBP17.21■□□□□ 0.35
DDR1-229ENST00000396342 FOXJ1Q92949 421 aa17.21■□□□□ 0.35
DDR1-229ENST00000396342 LRRC4Q9HBW1 653 aa17.21■□□□□ 0.35
DDR1-229ENST00000396342 OLA1Q9NTK5 396 aaKnown RBP17.21■□□□□ 0.35
DDR1-229ENST00000396342 MARK1Q9P0L2 795 aa17.21■□□□□ 0.35
DDR1-229ENST00000396342 SUSD2Q9UGT4 822 aa17.21■□□□□ 0.35
DDR1-229ENST00000396342 FAM237AA0A1B0GTK4 181 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 SYPP08247 313 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 CEACAM1P13688 526 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 MAPK8P45983 427 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 HARS2P49590 506 aaKnown RBP17.2■□□□□ 0.34
DDR1-229ENST00000396342 ZNF132P52740 706 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 IRX4P78413 519 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 PPP3CAQ08209 521 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 EFEMP1Q12805 493 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 WDR45BQ5MNZ6 344 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 SH3PXD2AQ5TCZ1 1133 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 KIAA1324Q6UXG2 1013 aaKnown RBP17.2■□□□□ 0.34
DDR1-229ENST00000396342 RGL4Q8IZJ4 473 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 ZNF276Q8N554 614 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 GOLGA1Q92805 767 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 BHMTQ93088 406 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 UBXN6Q9BZV1 441 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 CISHQ9NSE2 258 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 SLC6A14Q9UN76 642 aa17.2■□□□□ 0.34
DDR1-229ENST00000396342 TM4SF5O14894 197 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 ADAM23O75077 832 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 HMBSP08397 361 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 ACADMP11310 421 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 CD19P15391 556 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 CSRP1P21291 193 aaKnown RBP17.19■□□□□ 0.34
DDR1-229ENST00000396342 FKBP3Q00688 224 aaKnown RBP17.19■□□□□ 0.34
DDR1-229ENST00000396342 ZNF252P-AS1Q0IIN9 211 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 SGO2Q562F6 1265 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 PPP1R26Q5T8A7 1209 aaPredicted RBP17.19■□□□□ 0.34
DDR1-229ENST00000396342 SIX6OS1Q8N1H7 587 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 IPO4Q8TEX9 1081 aaKnown RBP17.19■□□□□ 0.34
DDR1-229ENST00000396342 GTPBP2Q9BX10 602 aaKnown RBP17.19■□□□□ 0.34
DDR1-229ENST00000396342 ZDHHC4Q9NPG8 344 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 MARCH2Q9P0N8 246 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 CALCOCO1Q9P1Z2 691 aa17.19■□□□□ 0.34
DDR1-229ENST00000396342 KIF26AQ9ULI4 1882 aaPredicted RBP17.18■□□□□ 0.34
DDR1-229ENST00000396342 SLC16A3O15427 465 aaKnown RBP17.18■□□□□ 0.34
DDR1-229ENST00000396342 TIMM44O43615 452 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 TBXAS1P24557 533 aaPredicted RBP17.18■□□□□ 0.34
DDR1-229ENST00000396342 PMLP29590 882 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 CORO1AP31146 461 aaKnown RBP17.18■□□□□ 0.34
DDR1-229ENST00000396342 PPP1R2P41236 205 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 BCAT1P54687 386 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 ZNF445P59923 1031 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 YWHAGP61981 247 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDR1-229ENST00000396342 SHC2P98077 582 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 MAP7D1Q3KQU3 841 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 EGFLAMQ63HQ2 1017 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 GPRIN1Q7Z2K8 1008 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 CCDC117Q8IWD4 279 aaPredicted RBP17.18■□□□□ 0.34
DDR1-229ENST00000396342 SFTPA1Q8IWL2 248 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 ANKRD52Q8NB46 1076 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 DDI1Q8WTU0 396 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 SMARCE1Q969G3 411 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 GSDMAQ96QA5 445 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 TWNKQ96RR1 684 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 APOBEC3GQ9HC16 384 aaKnown RBP17.18■□□□□ 0.34
DDR1-229ENST00000396342 ARMCX3Q9UH62 379 aaPredicted RBP17.18■□□□□ 0.34
DDR1-229ENST00000396342 NUDT5Q9UKK9 219 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 KIAA1257Q9ULG3 409 aa17.18■□□□□ 0.34
DDR1-229ENST00000396342 CYP8B1Q9UNU6 501 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms