RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 ELNP15502 786 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 IFRD2Q12894 506 aaPredicted RBP18.6■□□□□ 0.57
SREBF1-204ENST00000395756 SYPL2Q5VXT5 272 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 ARHGAP17Q68EM7 881 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 PCGF5Q86SE9 256 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 TADA2BQ86TJ2 420 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 C3orf58Q8NDZ4 430 aa18.6■□□□□ 0.57
SREBF1-204ENST00000395756 WDR91A4D1P6 747 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 CD52P31358 61 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 RDXP35241 583 aaKnown RBP18.59■□□□□ 0.57
SREBF1-204ENST00000395756 FBXW10Q5XX13 1052 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 CENPTQ96BT3 561 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 TRABDQ9H4I3 376 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 NRDE2Q9H7Z3 1164 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 USP29Q9HBJ7 922 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 UBN1Q9NPG3 1134 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.59■□□□□ 0.575e-7■■■□□ 16.2
SREBF1-204ENST00000395756 SAMD15Q9P1V8 674 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 ENDOD1O94919 500 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 L1CAMP32004 1257 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 PNPLA4P41247 253 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 SLC8A3P57103 927 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 GSTCDQ8NEC7 633 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 SPOCK2Q92563 424 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 MAML1Q92585 1016 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 TTC25Q96NG3 672 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 KRT82Q9NSB4 513 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 GDAP2Q9NXN4 497 aa18.59■□□□□ 0.57
SREBF1-204ENST00000395756 DUSP11O75319 330 aaKnown RBP18.58■□□□□ 0.57
SREBF1-204ENST00000395756 STIP1P31948 543 aaKnown RBP18.58■□□□□ 0.57
SREBF1-204ENST00000395756 SNX16P57768 344 aa18.58■□□□□ 0.57
SREBF1-204ENST00000395756 PDK2Q15119 407 aa18.58■□□□□ 0.57
SREBF1-204ENST00000395756 BSPRYQ5W0U4 402 aa18.58■□□□□ 0.57
SREBF1-204ENST00000395756 SIX6OS1Q8N1H7 587 aa18.58■□□□□ 0.57
SREBF1-204ENST00000395756 KCTD15Q96SI1 283 aaPredicted RBP18.58■□□□□ 0.57
SREBF1-204ENST00000395756 SEPT10Q9P0V9 454 aa18.58■□□□□ 0.57
SREBF1-204ENST00000395756 M0QYT0 321 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 CAPN9O14815 690 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 THP07101 528 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 SETSIPP0DME0 302 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 PAX7P23759 505 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 PRKCZQ05513 592 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 TAF2Q6P1X5 1199 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.58■□□□□ 0.56
SREBF1-204ENST00000395756 SOCS4Q8WXH5 440 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 TGS1Q96RS0 853 aaKnown RBP18.58■□□□□ 0.56
SREBF1-204ENST00000395756 LGMNQ99538 433 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 MTG1Q9BT17 334 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-204ENST00000395756 ALG13Q9NP73 1137 aaKnown RBP18.58■□□□□ 0.56
SREBF1-204ENST00000395756 GTF2IRD1Q9UHL9 959 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 ARL5CA6NH57 179 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 KRT4P19013 534 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 CA4P22748 312 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 TKTL1P51854 596 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 CACNA2D1P54289 1103 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 KCNT2Q6UVM3 1135 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 PAQR9Q6ZVX9 377 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 SLC26A9Q7LBE3 791 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 RELL1Q8IUW5 271 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 CTAGE3PQ8IX95 158 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 CCDC197Q8NCU1 140 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 FOXP3Q9BZS1 431 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 ETNK1Q9HBU6 452 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 RABGEF1Q9UJ41 708 aa18.58■□□□□ 0.56
SREBF1-204ENST00000395756 B3GAT3O94766 335 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 ASGR1P07306 291 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 HNRNPH1P31943 449 aaKnown RBP18.57■□□□□ 0.56
SREBF1-204ENST00000395756 RPA3P35244 121 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-204ENST00000395756 GRIA1P42261 906 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 RNASELQ05823 741 aaKnown RBP18.57■□□□□ 0.56
SREBF1-204ENST00000395756 NME8Q8N427 588 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 EDEM1Q92611 657 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 SPC25Q9HBM1 224 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 NOD1Q9Y239 953 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 MAD1L1Q9Y6D9 718 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 KBTBD13C9JR72 458 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 NRP1O14786 923 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 YY1P25490 414 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 PCBP1Q15365 356 aaKnown RBP eCLIP18.57■□□□□ 0.562e-9■■■■□ 25.4
SREBF1-204ENST00000395756 TRABD2AQ86V40 505 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 TP53INP2Q8IXH6 220 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 ATP11CQ8NB49 1132 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 CCNYQ8ND76 341 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 CSPG4P5Q96PW8 444 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 PPP1R10Q96QC0 940 aaKnown RBP18.57■□□□□ 0.56
SREBF1-204ENST00000395756 SMC6Q96SB8 1091 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 DUSP16Q9BY84 665 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 CRTAC1Q9NQ79 661 aa18.57■□□□□ 0.56
SREBF1-204ENST00000395756 F8W810 466 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 AP1G2O75843 785 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 FAM155BO75949 473 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 METTL18O95568 372 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 USP17L7P0C7H9 530 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 NPR3P17342 541 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 CCND3P30281 292 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-204ENST00000395756 YWHAZP63104 245 aaKnown RBP18.56■□□□□ 0.56
SREBF1-204ENST00000395756 CAP1Q01518 475 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 CLEC20AQ6ZU45 233 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 CEP128Q6ZU80 1094 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms