RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 CETN3O15182 167 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 HYAL3O43820 417 aaPredicted RBP14.28□□□□□ -0.12
SCAF11-203ENST00000395453 TRIM21P19474 475 aaKnown RBP14.28□□□□□ -0.12
SCAF11-203ENST00000395453 ADORA2BP29275 332 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 SLC6A11P48066 632 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 IRX4P78413 519 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 NUCB2P80303 420 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 MESP2Q0VG99 397 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 BECN1Q14457 450 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 ZNF658Q5TYW1 1059 aaPredicted RBP14.28□□□□□ -0.12
SCAF11-203ENST00000395453 KIAA1211LQ6NV74 962 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 GPRIN1Q7Z2K8 1008 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 FBXL13Q8NEE6 735 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 WBP2Q969T9 261 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 TIGD1Q96MW7 591 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 FAM124BQ9H5Z6 455 aaPredicted RBP14.28□□□□□ -0.12
SCAF11-203ENST00000395453 TLR8Q9NR97 1041 aaKnown RBP14.28□□□□□ -0.12
SCAF11-203ENST00000395453 ITPR1Q14643 2758 aa14.28□□□□□ -0.12
SCAF11-203ENST00000395453 ANTXRLA6NF34 631 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 PATE3B3GLJ2 98 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 SCAMP3O14828 347 aaKnown RBP14.27□□□□□ -0.12
SCAF11-203ENST00000395453 STX10O60499 249 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 GREM1O60565 184 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 TLR5O60602 858 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 ADH1CP00326 375 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 EPB41P11171 864 aaKnown RBP14.27□□□□□ -0.12
SCAF11-203ENST00000395453 LMAN2Q12907 356 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 LY6G5CQ5SRR4 150 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 HTR3DQ70Z44 454 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 C12orf40Q86WS4 652 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 ELOA2Q8IYF1 753 aaPredicted RBP14.27□□□□□ -0.12
SCAF11-203ENST00000395453 PHTF2Q8N3S3 785 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 ZNF276Q8N554 614 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 TTC39CQ8N584 583 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 CCDC150Q8NCX0 1101 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 TSTD1Q8NFU3 115 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 PNKPQ96T60 521 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 KLF16Q9BXK1 252 aaPredicted RBP14.27□□□□□ -0.12
SCAF11-203ENST00000395453 DUSP16Q9BY84 665 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 MMRN2Q9H8L6 949 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 CYLDQ9NQC7 956 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 OSER1Q9NX31 292 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 RAB20Q9NX57 234 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 EVLQ9UI08 416 aaPredicted RBP14.27□□□□□ -0.12
SCAF11-203ENST00000395453 INVSQ9Y283 1065 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 COQ4Q9Y3A0 265 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 PCDHA5Q9Y5H7 936 aa14.27□□□□□ -0.12
SCAF11-203ENST00000395453 CACNA1EQ15878 2313 aa14.27□□□□□ -0.13
SCAF11-203ENST00000395453 LOC400499M0QZD8 3231 aa14.27□□□□□ -0.13
SCAF11-203ENST00000395453 THADAQ6YHU6 1953 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 GOLGA6L4A6NEF3 574 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 TBX18O95935 607 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 ADH5P11766 374 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 CD58P19256 250 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 RDXP35241 583 aaKnown RBP14.26□□□□□ -0.13
SCAF11-203ENST00000395453 TNFRSF4P43489 277 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 MXI1P50539 228 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 KIF11P52732 1056 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 PMS1P54277 932 aaKnown RBP14.26□□□□□ -0.13
SCAF11-203ENST00000395453 MRPS21P82921 87 aaKnown RBP14.26□□□□□ -0.13
SCAF11-203ENST00000395453 FKBP3Q00688 224 aaKnown RBP14.26□□□□□ -0.13
SCAF11-203ENST00000395453 C2orf27AQ580R0 203 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 PPP1R26Q5T8A7 1209 aaPredicted RBP14.26□□□□□ -0.13
SCAF11-203ENST00000395453 ANKRD40Q6AI12 368 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 KLHDC10Q6PID8 442 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 SFTPA1Q8IWL2 248 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 BBS7Q8IWZ6 715 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 ETFBKMTQ8IXQ9 262 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 TATDN2Q93075 761 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 COL26A1Q96A83 441 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 NUSAP1Q9BXS6 441 aaKnown RBP14.26□□□□□ -0.13
SCAF11-203ENST00000395453 GTPBP4Q9BZE4 634 aaKnown RBP14.26□□□□□ -0.13
SCAF11-203ENST00000395453 KLK13Q9UKR3 277 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 MMP17Q9ULZ9 603 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 SH3BP1Q9Y3L3 701 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 USP3Q9Y6I4 520 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 LAMA5O15230 3695 aa14.26□□□□□ -0.13
SCAF11-203ENST00000395453 SETXQ7Z333 2677 aaKnown RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 GCN1Q92616 2671 aaKnown RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 RIOK3O14730 519 aaKnown RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 SLC16A3O15427 465 aaKnown RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 CYP26A1O43174 497 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 HOXC11O43248 304 aaPredicted RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 KAT7O95251 611 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 SMC2O95347 1197 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 ACO1P21399 889 aaKnown RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 ATP5C1P36542 298 aaKnown RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 GRIA2P42262 883 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 KIR2DL1P43626 348 aaPredicted RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 DHPSP49366 369 aaPredicted RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 RAD23BP54727 409 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 GAD2Q05329 585 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 HSF5Q4G112 596 aaPredicted RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 CCDC186Q7Z3E2 898 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 TMEM25Q86YD3 366 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 SLC4A11Q8NBS3 891 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 PIGKQ92643 395 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 ERCC4Q92889 916 aaPredicted RBP14.25□□□□□ -0.13
SCAF11-203ENST00000395453 UBXN6Q9BZV1 441 aa14.25□□□□□ -0.13
SCAF11-203ENST00000395453 DNAI2Q9GZS0 605 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms