RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 NAT14Q8WUY8 206 aa14.83□□□□□ -0.03
CLIP2-203ENST00000395060 DEPDC1BQ8WUY9 529 aa14.83□□□□□ -0.03
CLIP2-203ENST00000395060 NR1H4Q96RI1 486 aaPredicted RBP14.83□□□□□ -0.03
CLIP2-203ENST00000395060 RNPEPQ9H4A4 650 aa14.83□□□□□ -0.03
CLIP2-203ENST00000395060 ANKEF1Q9NU02 776 aa14.83□□□□□ -0.03
CLIP2-203ENST00000395060 GALNT8Q9NY28 637 aa14.83□□□□□ -0.03
CLIP2-203ENST00000395060 CNTNAP1P78357 1384 aa14.83□□□□□ -0.03
CLIP2-203ENST00000395060 SIPA1L1O43166 1804 aa14.83□□□□□ -0.03
CLIP2-203ENST00000395060 VAV1P15498 845 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 TCN1P20061 433 aaPredicted RBP14.83□□□□□ -0.04
CLIP2-203ENST00000395060 CRABP2P29373 138 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 STIP1P31948 543 aaKnown RBP14.83□□□□□ -0.04
CLIP2-203ENST00000395060 GTF2A2P52657 109 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 PGGT1BP53609 377 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 ACAP1Q15027 740 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 ZC3H12AQ5D1E8 599 aaKnown RBP14.83□□□□□ -0.04
CLIP2-203ENST00000395060 PEBP4Q96S96 227 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 OXCT2Q9BYC2 517 aaPredicted RBP14.83□□□□□ -0.04
CLIP2-203ENST00000395060 NGRNQ9NPE2 291 aaKnown RBP14.83□□□□□ -0.04
CLIP2-203ENST00000395060 HMGXB4Q9UGU5 601 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 USP18Q9UMW8 372 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 WNT10BO00744 389 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 NEMP1O14524 444 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 ADCY3O60266 1144 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 PFDN1O60925 122 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
CLIP2-203ENST00000395060 ERBB2P04626 1255 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 RGS7P49802 495 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 KRT76Q01546 638 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 CXCL9Q07325 125 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 CCNIQ14094 377 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 SPDYE2Q495Y8 402 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 DNAL1Q4LDG9 190 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 ATG14Q6ZNE5 492 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 RBM44Q6ZP01 1051 aaKnown RBP14.83□□□□□ -0.04
CLIP2-203ENST00000395060 FAM160B2Q86V87 743 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 CEP70Q8NHQ1 597 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 FAM172AQ8WUF8 416 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 ZNF778Q96MU6 729 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 FAM192AQ9GZU8 254 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 PXMP2Q9NR77 195 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 INPP5FQ9Y2H2 1132 aa14.83□□□□□ -0.04
CLIP2-203ENST00000395060 AIM2O14862 343 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 OSBPP22059 807 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 HMGB2P26583 209 aaKnown RBP14.82□□□□□ -0.04
CLIP2-203ENST00000395060 SNRPFP62306 86 aaKnown RBP14.82□□□□□ -0.04
CLIP2-203ENST00000395060 KRT81Q14533 505 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 GSTA3Q16772 222 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 SPDYAQ5MJ70 313 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 PDSS2Q86YH6 399 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 NIM1KQ8IY84 436 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 TNS4Q8IZW8 715 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.82□□□□□ -0.04
CLIP2-203ENST00000395060 STKLD1Q8NE28 680 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 KLHL4Q9C0H6 718 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 ARHGAP28Q9P2N2 729 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 APOBEC2Q9Y235 224 aaKnown RBP14.82□□□□□ -0.04
CLIP2-203ENST00000395060 HEMK1Q9Y5R4 338 aaPredicted RBP14.82□□□□□ -0.04
CLIP2-203ENST00000395060 E7ESA3 106 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 PEX1O43933 1283 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 DGAT1O75907 488 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 HMGCRP04035 888 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 NR3C2P08235 984 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 KRT7P08729 469 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 TBXAS1P24557 533 aaPredicted RBP14.82□□□□□ -0.04
CLIP2-203ENST00000395060 COPAP53621 1224 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 ZNF699Q32M78 642 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 UNC5AQ6ZN44 842 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 PTAR1Q7Z6K3 402 aaPredicted RBP14.82□□□□□ -0.04
CLIP2-203ENST00000395060 ATP6V0A1Q93050 837 aa14.82□□□□□ -0.04
CLIP2-203ENST00000395060 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
CLIP2-203ENST00000395060 F8W8V4 182 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 LYPLA2O95372 231 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 ZBED1O96006 694 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 CPOXP36551 454 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 SESN2P58004 480 aaPredicted RBP14.81□□□□□ -0.04
CLIP2-203ENST00000395060 FOLH1Q04609 750 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 TTLL12Q14166 644 aaPredicted RBP14.81□□□□□ -0.04
CLIP2-203ENST00000395060 N4BP2L1Q5TBK1 243 aaPredicted RBP14.81□□□□□ -0.04
CLIP2-203ENST00000395060 EEPD1Q7L9B9 569 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 WDR75Q8IWA0 830 aaKnown RBP14.81□□□□□ -0.04
CLIP2-203ENST00000395060 ADGRF2Q8IZF7 708 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 GREB1LQ9C091 1923 aaPredicted RBP14.81□□□□□ -0.04
CLIP2-203ENST00000395060 MYO18AQ92614 2054 aaKnown RBP14.81□□□□□ -0.04
CLIP2-203ENST00000395060 C15orf38-AP3S2A0A0A6YYH1 394 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 SIN3BO75182 1162 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 GJB1P08034 283 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 PMLP29590 882 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 SERPINB5P36952 375 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 ACTR2P61160 394 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 TEX44Q53QW1 395 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 FRMD7Q6ZUT3 714 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 ARPINQ7Z6K5 226 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 MCF2L2Q86YR7 1114 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 USP13Q92995 863 aaPredicted RBP14.81□□□□□ -0.04
CLIP2-203ENST00000395060 GMLQ99445 158 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 CGRRF1Q99675 332 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 NTPCRQ9BSD7 190 aaKnown RBP14.81□□□□□ -0.04
CLIP2-203ENST00000395060 PPCSQ9HAB8 311 aa14.81□□□□□ -0.04
CLIP2-203ENST00000395060 A0A1B0GTW7 788 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms