RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 GRAP2O75791 330 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 NCAM1P13591 858 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 PDGFRLQ15198 375 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 EML3Q32P44 896 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 TMEM31Q5JXX7 168 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 OLFML1Q6UWY5 402 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 ERICH1Q86X53 443 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 FMNL3Q8IVF7 1028 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 BBS7Q8IWZ6 715 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 FLCNQ8NFG4 579 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 SLC30A5Q8TAD4 765 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 C1QTNF1Q9BXJ1 281 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 MFSD1Q9H3U5 465 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 TRPV5Q9NQA5 729 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 NAALADL1Q9UQQ1 740 aa20.83■□□□□ 0.93
SNCA-203ENST00000394986 ITIH6Q6UXX5 1313 aa20.83■□□□□ 0.92
SNCA-203ENST00000394986 KIF26AQ9ULI4 1882 aaPredicted RBP20.83■□□□□ 0.92
SNCA-203ENST00000394986 A0A1W2PQJ5 194 aa20.82■□□□□ 0.92
SNCA-203ENST00000394986 E2F8A0AVK6 867 aa20.82■□□□□ 0.92
SNCA-203ENST00000394986 SHISA7A6NL88 538 aa20.82■□□□□ 0.92
SNCA-203ENST00000394986 GPR37L1O60883 481 aa20.82■□□□□ 0.92
SNCA-203ENST00000394986 KPNA1P52294 538 aaPredicted RBP20.82■□□□□ 0.92
SNCA-203ENST00000394986 RUNX3Q13761 415 aa20.82■□□□□ 0.92
SNCA-203ENST00000394986 SYPL2Q5VXT5 272 aa20.82■□□□□ 0.92
SNCA-203ENST00000394986 SYT11Q9BT88 431 aa20.82■□□□□ 0.92
SNCA-203ENST00000394986 TBC1D17Q9HA65 648 aa20.82■□□□□ 0.92
SNCA-203ENST00000394986 OLA1Q9NTK5 396 aaKnown RBP20.82■□□□□ 0.92
SNCA-203ENST00000394986 AIPL1Q9NZN9 384 aa20.82■□□□□ 0.92
SNCA-203ENST00000394986 STRIP2Q9ULQ0 834 aa20.82■□□□□ 0.92
SNCA-203ENST00000394986 TICRRQ7Z2Z1 1910 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 STC2O76061 302 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 CCDC172P0C7W6 258 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 SKILP12757 684 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 CASP14P31944 242 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 CLEC16AQ2KHT3 1053 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 ITPRIPL2Q3MIP1 535 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 CWF19L1Q69YN2 538 aaKnown RBP20.81■□□□□ 0.92
SNCA-203ENST00000394986 MSANTD2Q6P1R3 559 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 SARM1Q6SZW1 724 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 MMS22LQ6ZRQ5 1243 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 PHLDB2Q86SQ0 1253 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 XYLT1Q86Y38 959 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 VSTM4Q8IW00 320 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 ADAM32Q8TC27 787 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 DQX1Q8TE96 717 aaKnown RBP20.81■□□□□ 0.92
SNCA-203ENST00000394986 FOXQ1Q9C009 403 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 HAUS4Q9H6D7 363 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 CAPN11Q9UMQ6 739 aa20.81■□□□□ 0.92
SNCA-203ENST00000394986 STK25O00506 426 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 UNGP13051 313 aaPredicted RBP20.8■□□□□ 0.92
SNCA-203ENST00000394986 GABRB2P47870 512 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 YWHAZP63104 245 aaKnown RBP20.8■□□□□ 0.92
SNCA-203ENST00000394986 PITX1P78337 314 aaPredicted RBP20.8■□□□□ 0.92
SNCA-203ENST00000394986 ZBED6P86452 979 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 SLC6A3Q01959 620 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 GOLGA8FQ08AF8 430 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 GOLGA8DPQ0D2H9 430 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 NAIF1Q69YI7 327 aaPredicted RBP20.8■□□□□ 0.92
SNCA-203ENST00000394986 SPECC1LQ69YQ0 1117 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 TXNDC11Q6PKC3 985 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 TRIM72Q6ZMU5 477 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 TOGARAM2Q6ZUX3 1019 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 ZNF571Q7Z3V5 609 aaPredicted RBP20.8■□□□□ 0.92
SNCA-203ENST00000394986 ATP2A3Q93084 1043 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 C18orf8Q96DM3 657 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 CHFRQ96EP1 664 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 C11orf70Q9BRQ4 267 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 LRFN3Q9BTN0 628 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 TRIM5Q9C035 493 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 ECT2Q9H8V3 914 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 POPDC2Q9HBU9 364 aa20.8■□□□□ 0.92
SNCA-203ENST00000394986 SPECC1L-ADORA2AF8WAN1 911 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 GOLGA8SH3BPF8 625 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 CAPN9O14815 690 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 KLKB1P03952 638 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 CYP17A1P05093 508 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 CORO1AP31146 461 aaKnown RBP20.79■□□□□ 0.92
SNCA-203ENST00000394986 SNX16P57768 344 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 STARD6P59095 220 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 COG7P83436 770 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 PRKCQQ04759 706 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 KLHL30Q0D2K2 578 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 EFHC1Q5JVL4 640 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 HTR3DQ70Z44 454 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 SLC26A9Q7LBE3 791 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 TAC4Q86UU9 113 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 DEFB106AQ8N104 65 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 CPA6Q8N4T0 437 aa20.79■□□□□ 0.92
SNCA-203ENST00000394986 LSM7Q9UK45 103 aaKnown RBP20.79■□□□□ 0.92
SNCA-203ENST00000394986 LUC7L2Q9Y383 392 aaKnown RBP20.79■□□□□ 0.92
SNCA-203ENST00000394986 MTF2Q9Y483 593 aaPredicted RBP20.79■□□□□ 0.92
SNCA-203ENST00000394986 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.79■□□□□ 0.92
SNCA-203ENST00000394986 PRR33A8MZF0 331 aa20.78■□□□□ 0.92
SNCA-203ENST00000394986 HSF2BPO75031 334 aa20.78■□□□□ 0.92
SNCA-203ENST00000394986 NFATC1O95644 943 aa20.78■□□□□ 0.92
SNCA-203ENST00000394986 MMP8P22894 467 aa20.78■□□□□ 0.92
SNCA-203ENST00000394986 CTHP32929 405 aa20.78■□□□□ 0.92
SNCA-203ENST00000394986 PRKCIP41743 596 aa20.78■□□□□ 0.92
SNCA-203ENST00000394986 NSFP46459 744 aaKnown RBP20.78■□□□□ 0.92
SNCA-203ENST00000394986 CENPCQ03188 943 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms