RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 PFDN4Q9NQP4 134 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 CLCN6P51797 869 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 POU5F1Q01860 360 aaKnown RBP20.05■□□□□ 0.8
CXXC4-201ENST00000394767 ACAP1Q15027 740 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 TIGD7Q6NT04 549 aaPredicted RBP20.05■□□□□ 0.8
CXXC4-201ENST00000394767 LCLAT1Q6UWP7 414 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 ALKBH8Q96BT7 664 aaKnown RBP20.05■□□□□ 0.8
CXXC4-201ENST00000394767 O00370 1275 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 PFKMP08237 780 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 MRPS5P82675 430 aaKnown RBP20.05■□□□□ 0.8
CXXC4-201ENST00000394767 KLC3Q6P597 504 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 B3GALT6Q96L58 329 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 PPP1R2P1Q96PQ5 205 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 B3GNT5Q9BYG0 378 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 GPR63Q9BZJ6 419 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 PLAAQ9Y263 795 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 MYBPHLA2RUH7 354 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 ITIH2P19823 946 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 RAD23BP54727 409 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 COPS2P61201 443 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 TAF10Q12962 218 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 RPS6KA2Q15349 733 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 DPEP3Q9H4B8 488 aa20.05■□□□□ 0.8
CXXC4-201ENST00000394767 PRR23AA6NEV1 266 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 CLGNO14967 610 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 RAD51CO43502 376 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 IQCF3P0C7M6 154 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 KLHL38Q2WGJ6 581 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 CCDC121Q6ZUS5 278 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 PHF13Q86YI8 300 aaPredicted RBP20.04■□□□□ 0.8
CXXC4-201ENST00000394767 ACTL9Q8TC94 416 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 HDAC11Q96DB2 347 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 PLCD4Q9BRC7 762 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 INTS9Q9NV88 658 aaKnown RBP20.04■□□□□ 0.8
CXXC4-201ENST00000394767 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.04■□□□□ 0.8
CXXC4-201ENST00000394767 STK39Q9UEW8 545 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 NOVA2Q9UNW9 492 aaKnown RBP20.04■□□□□ 0.8
CXXC4-201ENST00000394767 LMO2P25791 158 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 RHOAP61586 193 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 MEI1Q5TIA1 1274 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 C16orf59Q7L2K0 433 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 MON1AQ86VX9 555 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 XPO6Q96QU8 1125 aaKnown RBP20.04■□□□□ 0.8
CXXC4-201ENST00000394767 RBM15Q96T37 977 aaKnown RBP eCLIP20.04■□□□□ 0.8
CXXC4-201ENST00000394767 ATP13A1Q9HD20 1204 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 NEU2Q9Y3R4 380 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 PPP1R37O75864 691 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 LRRC8CQ8TDW0 803 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 ZFATQ9P243 1243 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.04■□□□□ 0.8
CXXC4-201ENST00000394767 RNF40O75150 1001 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 ANXA9O76027 345 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 TROVE2P10155 538 aaKnown RBP eCLIP20.04■□□□□ 0.8
CXXC4-201ENST00000394767 C6orf118Q5T5N4 469 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 SMG7Q92540 1137 aaKnown RBP20.04■□□□□ 0.8
CXXC4-201ENST00000394767 SLC30A1Q9Y6M5 507 aa20.04■□□□□ 0.8
CXXC4-201ENST00000394767 ATXN8OSP0DMR3 200 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 SMAD3P84022 425 aaKnown RBP20.03■□□□□ 0.8
CXXC4-201ENST00000394767 ADCY2Q08462 1091 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 NXNQ6DKJ4 435 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 RETSATQ6NUM9 610 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 CSGALNACT1Q8TDX6 532 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 ZNF516Q92618 1163 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 PCED1BQ96HM7 432 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 VPS11Q9H270 941 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 ZNF197O14709 1029 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 NAA30Q147X3 362 aaPredicted RBP20.03■□□□□ 0.8
CXXC4-201ENST00000394767 NAPEPLDQ6IQ20 393 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 RASSF3Q86WH2 238 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 ENPP3O14638 875 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 CCL16O15467 120 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 TYMPP19971 482 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 GGCXP38435 758 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 ZNF143P52747 638 aaPredicted RBP20.03■□□□□ 0.8
CXXC4-201ENST00000394767 CCDC15Q0P6D6 951 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 COL6A1P12109 1028 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 ALS2CLQ60I27 953 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 MFSD7Q6UXD7 560 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 SCG3Q8WXD2 468 aaKnown RBP20.03■□□□□ 0.8
CXXC4-201ENST00000394767 DCUN1D1Q96GG9 259 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 OR12D3Q9UGF7 316 aa20.03■□□□□ 0.8
CXXC4-201ENST00000394767 A0A087WUV0 522 aaPredicted RBP20.02■□□□□ 0.8
CXXC4-201ENST00000394767 RPL7AP62424 266 aaKnown RBP20.02■□□□□ 0.8
CXXC4-201ENST00000394767 ATXN7L3BQ96GX2 97 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 NDFIP2Q9NV92 336 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 ZC3H7BQ9UGR2 993 aaKnown RBP20.02■□□□□ 0.8
CXXC4-201ENST00000394767 RAP1GAP2Q684P5 730 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 MAB21L3Q8N8X9 362 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 BADQ92934 168 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 OXCT2Q9BYC2 517 aaPredicted RBP20.02■□□□□ 0.8
CXXC4-201ENST00000394767 UBXN6Q9BZV1 441 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 NT5MQ9NPB1 228 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 SCN9AQ15858 1988 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 IL9RQ01113 521 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 ANKRD20A3Q5VUR7 823 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 NYAP1Q6ZVC0 841 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 DENND1CQ8IV53 801 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 SLC4A11Q8NBS3 891 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 C9orf72Q96LT7 481 aa20.02■□□□□ 0.8
CXXC4-201ENST00000394767 TMEM121Q9BTD3 319 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms